Detailed information    

insolico Bioinformatically predicted

Overview

Name   letA   Type   Regulator
Locus tag   QG728_RS07485 Genome accession   NZ_CP123854
Coordinates   1553668..1554303 (+) Length   211 a.a.
NCBI ID   WP_000633799.1    Uniprot ID   A0AA36K8B3
Organism   Acinetobacter baumannii strain WB4     
Function   regulate competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1548668..1559303
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QG728_RS07465 (QG728_07465) - 1548746..1549561 (+) 816 WP_000011164.1 DsbC family protein -
  QG728_RS07470 (QG728_07470) - 1549806..1551107 (+) 1302 WP_000805827.1 homoserine dehydrogenase -
  QG728_RS07475 (QG728_07475) thrC 1551163..1552302 (+) 1140 WP_000063593.1 threonine synthase -
  QG728_RS07480 (QG728_07480) pbpG 1552409..1553455 (-) 1047 WP_003384760.1 D-alanyl-D-alanine endopeptidase PBP7/8 -
  QG728_RS07485 (QG728_07485) letA 1553668..1554303 (+) 636 WP_000633799.1 response regulator Regulator
  QG728_RS07490 (QG728_07490) pilS 1554314..1555882 (+) 1569 WP_025467590.1 PAS domain-containing sensor histidine kinase Regulator
  QG728_RS07495 (QG728_07495) - 1555907..1557328 (+) 1422 WP_002044796.1 sigma-54 dependent transcriptional regulator -
  QG728_RS07500 (QG728_07500) - 1557332..1558516 (-) 1185 WP_000939105.1 S41 family peptidase -

Sequence

Protein


Download         Length: 211 a.a.        Molecular weight: 23147.79 Da        Isoelectric Point: 5.0959

>NTDB_id=752991 QG728_RS07485 WP_000633799.1 1553668..1554303(+) (letA) [Acinetobacter baumannii strain WB4]
MITVLVVDDHELVRTGICRMLEDHADVEVIGQAESGEEAIAIVRQQHPQVVLLDVNMPGIGGVETTRRLLQTAPETKVIA
VSGLAEEPYPSLLLKAGAKGYITKGAPIAEMVRAINKVMQGGKYFSADIAEQLASSYLSDTQQSPFDSLSEREMQVAMMV
VNCISAQEIADKLFVSVKTVNTYRYRIFEKLGIDSDVKLTHLAIRYGLIKP

Nucleotide


Download         Length: 636 bp        

>NTDB_id=752991 QG728_RS07485 WP_000633799.1 1553668..1554303(+) (letA) [Acinetobacter baumannii strain WB4]
TTGATTACAGTTTTAGTTGTCGATGACCATGAACTGGTACGTACGGGTATTTGCCGTATGTTAGAAGATCATGCCGATGT
TGAGGTAATTGGACAAGCCGAATCGGGCGAAGAAGCAATTGCTATCGTTCGCCAACAACATCCGCAAGTCGTACTGCTGG
ATGTCAACATGCCGGGCATCGGTGGCGTAGAAACAACCCGTCGTTTATTACAGACGGCTCCAGAGACGAAAGTCATTGCT
GTAAGCGGCCTCGCCGAAGAGCCTTACCCATCTTTATTATTAAAAGCCGGTGCAAAAGGCTATATCACTAAAGGCGCGCC
AATTGCCGAAATGGTTCGTGCAATTAATAAGGTCATGCAAGGCGGTAAATATTTTAGTGCAGATATTGCCGAACAACTCG
CGAGCTCATATTTATCCGACACTCAACAATCCCCTTTTGATTCGTTATCAGAACGGGAAATGCAAGTTGCAATGATGGTC
GTCAACTGTATTAGCGCCCAAGAAATTGCCGATAAACTTTTTGTAAGTGTGAAAACTGTAAATACTTACCGTTATCGTAT
TTTTGAAAAGTTAGGAATTGATAGCGATGTAAAACTAACACATCTTGCGATTCGTTACGGTTTGATCAAGCCATAA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(4-116)

Bacterial regulatory proteins, luxR family (GerE)

(147-203)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0AA36K8B3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  letA Legionella pneumophila str. Paris

55.238

99.526

0.55
  letA Legionella pneumophila strain ERS1305867

55.238

99.526

0.55