Detailed information NTG0752657

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: QFA72_RS10405
• Genome accession: NZ_CP123780
• Coordinates: 2378533..2379831 (-)
• Length: 432 a.a.
• NCBI ID: WP_006124414.1
• Uniprot ID: A0ABM9GT83
• Organism: Streptomyces sp. SH5
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 2373533..2384831

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QFA72_RS10395 (QFA72_10395)	-	2374695..2377316 (-)	2622	WP_189526357.1	valine--tRNA ligase	-
QFA72_RS10400 (QFA72_10400)	-	2377455..2378459 (+)	1005	WP_280929757.1	hypothetical protein	-
QFA72_RS10405 (QFA72_10405)	clpX	2378533..2379831 (-)	1299	WP_006124414.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
QFA72_RS10410 (QFA72_10410)	clpP	2379989..2380672 (-)	684	WP_006124415.1	ATP-dependent Clp protease proteolytic subunit	Regulator
QFA72_RS10415 (QFA72_10415)	-	2380755..2381360 (-)	606	WP_048858618.1	ATP-dependent Clp protease proteolytic subunit	-
QFA72_RS10420 (QFA72_10420)	tig	2381658..2383058 (-)	1401	WP_189526360.1	trigger factor	-
QFA72_RS10435 (QFA72_10435)	-	2383644..2383838 (-)	195	WP_280929759.1	hypothetical protein	-

Sequence

Protein

• Length: 432 a.a.
• Molecular weight: 47315.16 Da
• Isoelectric Point: 4.7838

>NTDB_id=752657 QFA72_RS10405 WP_006124414.1 2378533..2379831(-) (clpX) [Streptomyces sp. SH5]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQEP
AKKALSVAVYNHYKRVQAGENGGGAGREDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFSGLEKIIESRAGAKGIGFGATIRSKLEIQASDQFQEVMPEDLVKFGMIPEFIGRLPVLTSVHNLDR
EALLQILIEPRNALVKQYQRLFELDGVELDFEREALEAIADQAILRQTGARGLRAIMEEVLQSVMYEVPSRKDVARVVIT
PDVVRDNVNPTLVPREPRTIGKNDGGRHEKSA

Nucleotide

• Length: 1299 bp

>NTDB_id=752657 QFA72_RS10405 WP_006124414.1 2378533..2379831(-) (clpX) [Streptomyces sp. SH5]
GTGGCACGCATCGGTGATGGCGGCGACCTGCTCAAGTGCTCGTTCTGCGGAAAGAGCCAGAAGCAGGTGAAGAAGCTCAT
CGCGGGACCCGGTGTGTACATCTGCGACGAGTGCATCGATCTCTGCAACGAGATCATCGAGGAGGAGCTCGCGGAGACGA
GCGAGGTGCGCTGGGAAGAGCTTCCCAAGCCCCGCGAGATCTACGAGTTCCTGGAGGGGTACGTCGTCGGGCAGGAGCCC
GCGAAGAAGGCCCTCTCGGTCGCGGTGTACAACCACTACAAGCGGGTCCAGGCCGGGGAGAACGGCGGCGGTGCCGGTCG
TGAGGACGCGATCGAGCTCGCCAAGTCGAACATCCTCCTGCTGGGCCCCACGGGTTCCGGTAAGACGCTTCTCGCCCAGA
CGCTGGCCCGCATGCTCAACGTCCCGTTCGCCATCGCGGACGCGACGGCGCTGACGGAGGCCGGCTATGTCGGCGAGGAC
GTCGAGAACATCCTGCTCAAGCTGATCCAGGCGGCCGACTACGACGTCAAGAAGGCCGAGACCGGGATCATCTACATCGA
CGAGATCGACAAGGTCGCCCGCAAGAGCGAGAACCCGTCGATCACCCGCGATGTCTCCGGCGAGGGCGTCCAGCAGGCCC
TGCTGAAGATCCTGGAGGGCACCACCGCCTCCGTCCCGCCGCAGGGCGGACGCAAGCACCCCCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTGCTCTTCATCGTGGGCGGCGCGTTCTCCGGCCTGGAGAAGATCATCGAGTCCCGGGCCGGCGC
CAAGGGCATCGGCTTCGGCGCCACGATCCGCTCCAAGCTGGAGATCCAGGCGAGCGACCAGTTCCAGGAGGTCATGCCGG
AGGACCTGGTGAAGTTCGGGATGATCCCGGAGTTCATCGGCCGTCTCCCCGTGCTGACCTCGGTCCACAACCTGGACCGC
GAGGCCCTGCTCCAGATCCTCATCGAGCCGCGCAACGCCCTGGTCAAGCAGTACCAGCGCCTGTTCGAACTCGACGGCGT
GGAGCTGGACTTCGAGCGCGAGGCGCTGGAGGCCATCGCCGACCAGGCGATCCTGCGCCAGACCGGCGCGCGCGGTCTGC
GGGCGATCATGGAGGAAGTCCTCCAGTCCGTGATGTACGAGGTCCCGTCCCGCAAGGACGTCGCCCGCGTCGTCATCACG
CCCGACGTCGTCCGCGACAACGTCAACCCGACGCTGGTCCCGCGCGAGCCGCGCACGATCGGCAAGAACGACGGCGGCCG
CCACGAGAAGTCCGCGTAA

Domains

Predicted by InterProScan.

• AAA domain (Cdc48 subfamily) (AAA_2) (115-311)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	63.682	93.056	0.593
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	53.398	95.37	0.509