Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   D3P44_RS19285 Genome accession   NZ_CP110110
Coordinates   4066170..4066577 (-) Length   135 a.a.
NCBI ID   WP_003282729.1    Uniprot ID   -
Organism   Stutzerimonas balearica strain Z8     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 4061170..4071577
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  D3P44_RS19265 (D3P44_019265) - 4062132..4062998 (-) 867 WP_200629436.1 CheR family methyltransferase -
  D3P44_RS19270 (D3P44_019270) - 4063054..4065102 (-) 2049 WP_041108374.1 methyl-accepting chemotaxis protein -
  D3P44_RS19275 (D3P44_019275) - 4065190..4065726 (-) 537 WP_212543507.1 chemotaxis protein CheW -
  D3P44_RS19280 (D3P44_019280) pilH 4065759..4066124 (-) 366 WP_041108377.1 twitching motility response regulator PilH -
  D3P44_RS19285 (D3P44_019285) pilG 4066170..4066577 (-) 408 WP_003282729.1 twitching motility response regulator PilG Regulator
  D3P44_RS19290 (D3P44_019290) gshB 4066806..4067756 (+) 951 WP_212543506.1 glutathione synthase -
  D3P44_RS19295 (D3P44_019295) - 4067843..4068736 (+) 894 WP_043222397.1 energy transducer TonB -
  D3P44_RS19300 (D3P44_019300) - 4068797..4069366 (+) 570 WP_041108383.1 YqgE/AlgH family protein -
  D3P44_RS19305 (D3P44_019305) ruvX 4069363..4069794 (+) 432 WP_041108385.1 Holliday junction resolvase RuvX -
  D3P44_RS19310 (D3P44_019310) pyrR 4069810..4070322 (+) 513 WP_041108387.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  D3P44_RS19315 (D3P44_019315) - 4070332..4071354 (+) 1023 WP_268845828.1 aspartate carbamoyltransferase catalytic subunit -

Sequence

Protein


Download         Length: 135 a.a.        Molecular weight: 14826.22 Da        Isoelectric Point: 7.2439

>NTDB_id=752429 D3P44_RS19285 WP_003282729.1 4066170..4066577(-) (pilG) [Stutzerimonas balearica strain Z8]
MEQHSEGLKVMVIDDSKTIRRTAETLLKKVGCDVITAVDGFDALAKIADTHPRIIFVDIMMPRLDGYQTCALIKNNSSFK
STPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKEELLGAIKAHVPDFAPVEQAS

Nucleotide


Download         Length: 408 bp        

>NTDB_id=752429 D3P44_RS19285 WP_003282729.1 4066170..4066577(-) (pilG) [Stutzerimonas balearica strain Z8]
ATGGAACAGCACTCCGAGGGCTTGAAGGTCATGGTGATCGACGATTCGAAAACGATTCGTCGGACCGCTGAAACCCTGCT
GAAAAAGGTAGGGTGCGACGTCATCACCGCGGTGGATGGATTCGATGCACTGGCGAAGATCGCCGATACCCACCCCCGCA
TCATCTTCGTAGACATTATGATGCCCAGGCTGGATGGCTATCAGACCTGTGCGCTCATCAAGAACAACAGTTCCTTCAAG
TCGACGCCGGTCATCATGCTCTCGTCCAAGGACGGTCTGTTCGACAAGGCCAAGGGGCGGATCGTCGGGTCTGATCAGTA
TCTGACCAAGCCGTTCAGCAAAGAAGAGCTGCTCGGTGCGATCAAGGCCCATGTGCCGGACTTCGCGCCAGTGGAGCAGG
CATCCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

76

92.593

0.704
  vicR Streptococcus mutans UA159

42.857

93.333

0.4