Detailed information NTG0752415

Bioinformatically predicted

Overview

• Name: comA
• Type: Machinery gene
• Locus tag: D3P44_RS07460
• Genome accession: NZ_CP110110
• Coordinates: 1585610..1587865 (+)
• Length: 751 a.a.
• NCBI ID: WP_212543080.1
• Uniprot ID: -
• Organism: Stutzerimonas balearica strain Z8
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1580610..1592865

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
D3P44_RS07430 (D3P44_007430)	-	1580757..1581062 (-)	306	WP_043219370.1	hypothetical protein	-
D3P44_RS07435 (D3P44_007435)	-	1581067..1581639 (-)	573	WP_212543054.1	PilZ domain-containing protein	-
D3P44_RS07440 (D3P44_007440)	-	1581734..1582981 (+)	1248	WP_041106118.1	lipoprotein-releasing ABC transporter permease subunit	-
D3P44_RS07445 (D3P44_007445)	lolD	1582974..1583684 (+)	711	WP_061340956.1	lipoprotein-releasing ABC transporter ATP-binding protein LolD	-
D3P44_RS07450 (D3P44_007450)	-	1583684..1584928 (+)	1245	WP_061341023.1	lipoprotein-releasing ABC transporter permease subunit	-
D3P44_RS07455 (D3P44_007455)	-	1584932..1585447 (-)	516	WP_041106114.1	DUF2062 domain-containing protein	-
D3P44_RS07460 (D3P44_007460)	comA	1585610..1587865 (+)	2256	WP_212543080.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
D3P44_RS07465 (D3P44_007465)	-	1587894..1588526 (+)	633	WP_041106112.1	MotA/TolQ/ExbB proton channel family protein	-
D3P44_RS07470 (D3P44_007470)	-	1588523..1588951 (+)	429	WP_041106110.1	ExbD/TolR family protein	-
D3P44_RS07475 (D3P44_007475)	lpxK	1588951..1589952 (+)	1002	WP_212543055.1	tetraacyldisaccharide 4'-kinase	-
D3P44_RS07480 (D3P44_007480)	-	1589999..1590184 (+)	186	WP_041106106.1	Trm112 family protein	-
D3P44_RS07485 (D3P44_007485)	kdsB	1590181..1590951 (+)	771	WP_212543056.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
D3P44_RS07490 (D3P44_007490)	-	1590948..1591412 (+)	465	WP_212543057.1	low molecular weight protein-tyrosine-phosphatase	-
D3P44_RS07495 (D3P44_007495)	murB	1591409..1592428 (+)	1020	WP_043219387.1	UDP-N-acetylmuramate dehydrogenase	-

Sequence

Protein

• Length: 751 a.a.
• Molecular weight: 81374.03 Da
• Isoelectric Point: 9.6335

>NTDB_id=752415 D3P44_RS07460 WP_212543080.1 1585610..1587865(+) (comA) [Stutzerimonas balearica strain Z8]
MAALAVGLLVPRWLPELPAGALLALLGATAVGAMCWKRTRPFACFALGLVWACWQAQLALDDRLPVDLDGRTFWLEGVIV
GLPATIDGVVRFELTDIQSRHAGLPSRLRLGWHGGPALRAGERWRLAARLKRPRAMVNPQTFDYEAWLLSRHIGATGTVK
AGERVAASVTPVGWRDALRQRLAALDAHGRSGAIAALVVGDDSGLTPGDWQILQDTGTVHLLVISGQHVAMLAGLLYGLV
HLFYRLGCWPSRLPWLPVACGLAFGGALGYAWLAGFEVPVQRACVMVAAVLLWRLRYRHLGVWFPLLLALVLVLLANPLV
SVQPGFWLSFAAVALLVWVFAGRLGAAGWWRTLLRAQWAMTLGLLPMMLMLGLPVSFSGPLANLVAVPWVSLTVPFALVG
TAALYLPLGLGESLLNGVGWSLQGLFGLLAWVAGWQPAWLAPQASGWMLLAASLGALILLLPAGIPFRLFGGLLMLPLLF
VGSERPPPGRAEIHVLDVGQGLSVLVRTQGHDLLYDAGPRYGRFDIGERVVVPSLRRLGTRQLDLLLLSHADSDHAGGAQ
AVLRSLPVRRMLSGEAQALDLPAVEDCRPGERWRWDEVRFETWRWLRAGDGNQASCVLAVEAAGERILLTGDLDSAAEQA
LLGSRFNPRSDWLLLGHHGSRTSTSVAFLSAVAPSAALVSRSAHNPFGHPHSEVLHRLDEAGIPLYDTARDGALRIVLGS
FTAPQGLRWERRFWRENENGSRRLAAGPVLE

Nucleotide

• Length: 2256 bp

>NTDB_id=752415 D3P44_RS07460 WP_212543080.1 1585610..1587865(+) (comA) [Stutzerimonas balearica strain Z8]
ATGGCCGCGCTGGCGGTGGGTTTGCTGGTGCCGCGCTGGCTGCCCGAGTTGCCGGCAGGCGCTCTGTTGGCACTGCTGGG
TGCAACGGCGGTTGGCGCGATGTGCTGGAAGCGCACGCGCCCCTTTGCGTGTTTCGCCCTGGGCCTGGTATGGGCCTGTT
GGCAGGCGCAGCTCGCCCTCGATGACCGACTCCCGGTCGATCTGGATGGCCGCACCTTCTGGCTCGAGGGCGTGATCGTC
GGCTTGCCTGCAACCATCGATGGGGTGGTTCGCTTCGAACTGACCGACATCCAGTCGCGCCATGCCGGCCTGCCGTCGCG
CCTTCGCCTTGGCTGGCACGGCGGGCCTGCGCTTCGGGCCGGTGAGCGCTGGCGACTCGCGGCACGTCTGAAACGGCCTC
GCGCAATGGTCAATCCACAGACCTTCGACTATGAGGCCTGGCTGCTCTCAAGGCACATCGGCGCGACAGGTACGGTAAAG
GCGGGCGAGCGAGTCGCGGCGTCCGTCACGCCCGTCGGCTGGCGCGATGCGCTCAGGCAGCGGCTGGCTGCGCTCGATGC
CCATGGTCGCTCGGGTGCGATTGCGGCGCTGGTCGTCGGCGACGACTCCGGGCTCACGCCCGGCGATTGGCAGATCCTGC
AGGACACCGGCACGGTGCACTTACTGGTAATTTCCGGTCAGCATGTGGCGATGCTGGCTGGACTGCTCTATGGGCTGGTC
CATTTGTTCTACCGTCTGGGCTGCTGGCCTTCGCGCCTGCCGTGGCTGCCGGTTGCATGCGGTCTCGCTTTCGGCGGCGC
CCTGGGCTATGCCTGGCTGGCGGGGTTCGAGGTGCCGGTACAGCGCGCCTGTGTAATGGTTGCGGCAGTGCTGCTTTGGC
GGCTGCGCTACCGGCATCTCGGCGTCTGGTTCCCCTTGCTGCTCGCCTTGGTCCTGGTGCTGCTGGCCAACCCGCTGGTC
AGCGTGCAGCCAGGGTTCTGGCTGTCGTTCGCTGCAGTCGCGTTGCTGGTGTGGGTCTTTGCCGGCCGGCTCGGGGCTGC
CGGCTGGTGGCGCACGCTCTTGCGCGCGCAGTGGGCAATGACGCTCGGCCTGCTACCGATGATGTTGATGCTCGGGCTTC
CGGTCAGCTTCAGCGGGCCGCTTGCCAACCTCGTAGCGGTACCCTGGGTCAGCCTGACCGTTCCGTTTGCCCTCGTGGGA
ACTGCCGCGCTTTATCTACCGCTGGGGCTCGGGGAGAGCCTGCTGAATGGGGTAGGTTGGTCATTGCAGGGCTTGTTCGG
CTTGCTGGCCTGGGTCGCTGGCTGGCAGCCGGCCTGGCTCGCGCCGCAAGCCTCTGGCTGGATGCTGCTGGCCGCGAGCC
TTGGGGCGCTGATTCTGCTGCTGCCGGCAGGCATTCCGTTCCGTCTTTTCGGCGGTCTCCTGATGCTGCCCTTGCTTTTC
GTCGGCAGCGAACGCCCACCTCCGGGACGTGCCGAGATCCATGTACTGGATGTCGGTCAAGGGCTGTCAGTCCTGGTCCG
CACGCAGGGCCACGATCTGCTCTACGATGCCGGCCCCCGTTATGGTCGCTTCGATATCGGCGAGCGCGTGGTGGTGCCTT
CGTTACGTCGACTGGGGACCCGACAGCTTGATCTTTTGCTGCTCAGCCACGCCGACAGTGACCATGCTGGGGGCGCCCAG
GCGGTACTTCGCTCTTTGCCGGTGCGCCGGATGCTAAGCGGTGAGGCGCAGGCATTGGACCTTCCGGCTGTAGAGGACTG
CCGGCCCGGCGAACGCTGGCGCTGGGATGAGGTGCGCTTCGAGACATGGCGCTGGCTGCGTGCAGGCGACGGAAACCAGG
CGTCCTGCGTGCTGGCGGTCGAGGCCGCCGGCGAACGGATTCTGCTGACGGGCGATCTGGACAGCGCCGCCGAGCAGGCC
CTGCTCGGCAGCCGCTTTAACCCTCGAAGCGACTGGTTGCTGCTTGGACATCATGGCAGCCGCACTTCGACTTCTGTCGC
CTTTCTCTCGGCCGTTGCGCCAAGCGCGGCGTTGGTGTCGCGTAGCGCACACAACCCGTTCGGGCACCCGCACTCCGAGG
TGCTGCATCGTTTGGATGAGGCGGGCATACCGCTCTACGACACGGCTCGGGACGGCGCCTTGCGCATAGTACTGGGCAGC
TTCACTGCGCCCCAGGGTTTACGCTGGGAGCGTCGGTTCTGGCGGGAAAATGAGAACGGCAGCCGTCGGCTGGCGGCAGG
CCCTGTGCTAGAGTGA

Domains

Predicted by InterproScan.

• Metallo-beta-lactamase superfamily (Lactamase_B) (497-681)

• Domain of unknown function (DUF4131) (DUF4131) (19-164)

• Competence protein (Competence) (197-461)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Pseudomonas stutzeri DSM 10701	66.477	93.742	0.623
comA	Ralstonia pseudosolanacearum GMI1000	36.863	100	0.376