Detailed information NTG0752407

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: D3P44_RS02665
• Genome accession: NZ_CP110110
• Coordinates: 561937..563001 (+)
• Length: 354 a.a.
• NCBI ID: WP_061337879.1
• Uniprot ID: A0A9X7V817
• Organism: Stutzerimonas balearica strain Z8
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 556937..568001

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
D3P44_RS02650 (D3P44_002650)	-	556986..557777 (+)	792	WP_212542808.1	thermonuclease family protein	-
D3P44_RS02655 (D3P44_002655)	-	557937..559202 (+)	1266	WP_043218294.1	malic enzyme-like NAD(P)-binding protein	-
D3P44_RS02660 (D3P44_002660)	-	559344..561755 (-)	2412	WP_212542807.1	penicillin-binding protein 1A	-
D3P44_RS02665 (D3P44_002665)	pilM	561937..563001 (+)	1065	WP_061337879.1	pilus assembly protein PilM	Machinery gene
D3P44_RS02670 (D3P44_002670)	-	563001..563573 (+)	573	WP_043218300.1	PilN domain-containing protein	-
D3P44_RS02675 (D3P44_002675)	pilO	563570..564193 (+)	624	WP_043218303.1	type 4a pilus biogenesis protein PilO	-
D3P44_RS02680 (D3P44_002680)	-	564190..564717 (+)	528	WP_212542806.1	pilus assembly protein PilP	-
D3P44_RS02685 (D3P44_002685)	pilQ	564773..566863 (+)	2091	WP_061339735.1	type IV pilus secretin PilQ	Machinery gene
D3P44_RS02690 (D3P44_002690)	aroK	566868..567413 (+)	546	WP_061339736.1	shikimate kinase AroK	-

Sequence

Protein

• Length: 354 a.a.
• Molecular weight: 37908.36 Da
• Isoelectric Point: 4.5789

>NTDB_id=752407 D3P44_RS02665 WP_061337879.1 561937..563001(+) (pilM) [Stutzerimonas balearica strain Z8]
MLGLFTKKANTLLGIDISSTSVKLLELSRSGNRYRVEAYAVEPLPPNAVVEKNIAELEGVGQALQRVVARAKTGCKQAAV
AVSGSAVITKTIEMDGGLSDDELENQLKIEADQYIPYPLEEVAIDFEVQGPAARAPGRVDVLLAACRKENVEIREAALAL
AGLSAKVVDVEAYALERSYDLLAPMLAQGHADLTVAIVDIGATMTTLSVLHNGRTIYTREQLFGGRQLTEEIQRRYGLSV
EEAGLAKKQGGLPDDYETEVLQPFKEAVVQQVSRSLQFFFAAGQFHDVDCILLAGGTASIPDLDRLIQQKVGTQTMVANP
FADMSLSSKVNAGALASDAPALMIACGLALRSFD

Nucleotide

• Length: 1065 bp

>NTDB_id=752407 D3P44_RS02665 WP_061337879.1 561937..563001(+) (pilM) [Stutzerimonas balearica strain Z8]
GTGCTAGGGCTCTTCACTAAGAAAGCGAATACGCTACTTGGGATCGACATTAGTTCGACCTCGGTCAAGCTCCTGGAATT
AAGCCGCTCAGGCAATCGCTATCGGGTCGAGGCGTACGCCGTTGAGCCTTTGCCGCCCAACGCAGTGGTCGAGAAGAACA
TCGCCGAGCTGGAGGGCGTCGGGCAGGCCCTGCAGCGTGTTGTGGCGCGCGCCAAGACCGGTTGCAAGCAAGCCGCTGTC
GCTGTCTCCGGCTCGGCGGTCATTACCAAGACCATCGAAATGGACGGCGGCCTGAGCGATGACGAGCTGGAGAATCAGCT
CAAGATCGAGGCGGACCAGTACATTCCTTACCCGCTCGAAGAAGTTGCCATCGATTTCGAGGTTCAGGGTCCTGCGGCGC
GCGCGCCCGGGCGCGTGGACGTGCTGCTTGCGGCCTGTCGCAAGGAGAACGTGGAGATCCGCGAGGCCGCTCTAGCGCTC
GCCGGTCTGAGCGCAAAGGTGGTCGATGTAGAGGCGTATGCGCTAGAGCGGTCCTACGATCTGCTCGCGCCCATGCTTGC
ACAGGGGCACGCCGATCTCACCGTCGCCATCGTCGATATTGGCGCCACCATGACCACGCTCAGTGTGCTGCACAACGGCC
GTACCATTTATACCCGGGAGCAGCTGTTTGGCGGTCGCCAGCTCACCGAGGAAATTCAGCGTCGCTACGGGCTTTCGGTG
GAGGAGGCAGGGCTGGCGAAGAAACAGGGTGGCTTGCCGGACGACTACGAAACCGAAGTGTTGCAGCCGTTCAAGGAGGC
GGTCGTTCAGCAGGTGTCGCGCTCACTGCAGTTCTTTTTCGCAGCCGGTCAGTTCCATGACGTGGATTGCATTCTGCTGG
CAGGTGGCACGGCTTCGATACCGGATCTCGACCGGCTCATCCAGCAGAAGGTGGGCACGCAGACCATGGTTGCCAATCCG
TTCGCCGACATGTCGCTGAGCAGCAAGGTCAACGCCGGGGCGCTGGCGAGCGATGCGCCCGCGCTGATGATTGCCTGTGG
CTTGGCCCTGAGGAGCTTCGACTGA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-353)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	57.062	100	0.571
comM	Acinetobacter nosocomialis M2	57.062	100	0.571
comM	Acinetobacter baylyi ADP1	53.955	100	0.54
pilM	Legionella pneumophila strain ERS1305867	48.305	100	0.483