Detailed information
Bioinformatically predicted
Overview
| Name | comX/sigX | Type | Regulator |
| Locus tag | OHM48_RS00410 | Genome accession | NZ_CP109942 |
| Coordinates | 71446..71712 (+) | Length | 88 a.a. |
| NCBI ID | WP_014635810.1 | Uniprot ID | A0A2K1SXG9 |
| Organism | Streptococcus suis strain ID35541 | ||
| Function | activate transcription of late competence genes (predicted from homology) Competence regulation |
||
Genomic Context
Location: 66446..76712
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OHM48_RS00375 (OHM48_00375) | cinA | 66452..67633 (+) | 1182 | WP_012774894.1 | competence/damage-inducible protein A | Machinery gene |
| OHM48_RS00380 (OHM48_00380) | recA | 67685..68836 (+) | 1152 | WP_011922545.1 | recombinase RecA | Machinery gene |
| OHM48_RS00385 (OHM48_00385) | spx | 69072..69470 (+) | 399 | WP_002939362.1 | transcriptional regulator Spx | - |
| OHM48_RS00390 (OHM48_00390) | - | 69570..69836 (+) | 267 | WP_002939360.1 | IreB family regulatory phosphoprotein | - |
| OHM48_RS00395 (OHM48_00395) | ruvX | 69836..70255 (+) | 420 | WP_002939356.1 | Holliday junction resolvase RuvX | - |
| OHM48_RS00400 (OHM48_00400) | - | 70267..70587 (+) | 321 | WP_002939343.1 | DUF1292 domain-containing protein | - |
| OHM48_RS00405 (OHM48_00405) | - | 70795..71373 (+) | 579 | WP_012774895.1 | nucleotidyltransferase family protein | - |
| OHM48_RS00410 (OHM48_00410) | comX/sigX | 71446..71712 (+) | 267 | WP_014635810.1 | hypothetical protein | Regulator |
| OHM48_RS00415 (OHM48_00415) | rpsJ | 72035..72343 (+) | 309 | WP_011922546.1 | 30S ribosomal protein S10 | - |
| OHM48_RS00420 (OHM48_00420) | rplC | 72440..73066 (+) | 627 | WP_011921686.1 | 50S ribosomal protein L3 | - |
| OHM48_RS00425 (OHM48_00425) | rplD | 73091..73714 (+) | 624 | WP_105112758.1 | 50S ribosomal protein L4 | - |
| OHM48_RS00430 (OHM48_00430) | - | 73714..74013 (+) | 300 | WP_004195491.1 | 50S ribosomal protein L23 | - |
| OHM48_RS00435 (OHM48_00435) | rplB | 74031..74864 (+) | 834 | WP_002936663.1 | 50S ribosomal protein L2 | - |
| OHM48_RS00440 (OHM48_00440) | rpsS | 75115..75396 (+) | 282 | WP_000533766.1 | 30S ribosomal protein S19 | - |
| OHM48_RS00445 (OHM48_00445) | rplV | 75414..75758 (+) | 345 | WP_002936662.1 | 50S ribosomal protein L22 | - |
| OHM48_RS00450 (OHM48_00450) | rpsC | 75771..76424 (+) | 654 | WP_002936661.1 | 30S ribosomal protein S3 | - |
Sequence
Protein
Download Length: 88 a.a. Molecular weight: 10670.50 Da Isoelectric Point: 9.1949
>NTDB_id=751069 OHM48_RS00410 WP_014635810.1 71446..71712(+) (comX/sigX) [Streptococcus suis strain ID35541]
MEFETVCLKVRNLGRLYCYFKVKFRTHIEAIIRKQESQKCKFDRLLHEDIHSLIQSPSLGNDELLMLWGLLRDYRKNLIN
DRLENMKN
MEFETVCLKVRNLGRLYCYFKVKFRTHIEAIIRKQESQKCKFDRLLHEDIHSLIQSPSLGNDELLMLWGLLRDYRKNLIN
DRLENMKN
Nucleotide
Download Length: 267 bp
>NTDB_id=751069 OHM48_RS00410 WP_014635810.1 71446..71712(+) (comX/sigX) [Streptococcus suis strain ID35541]
ATGGAATTTGAAACGGTTTGTTTGAAGGTTAGAAACTTAGGTAGGCTATATTGCTACTTCAAAGTTAAATTTAGAACCCA
TATCGAGGCTATAATTCGTAAACAGGAAAGTCAAAAATGTAAATTTGATCGTCTCCTCCATGAAGATATTCATAGTTTGA
TTCAATCACCGAGCTTGGGTAATGATGAGTTGCTGATGTTATGGGGTCTCCTGAGAGATTATCGAAAAAATTTAATCAAT
GACCGACTTGAAAATATGAAAAATTGA
ATGGAATTTGAAACGGTTTGTTTGAAGGTTAGAAACTTAGGTAGGCTATATTGCTACTTCAAAGTTAAATTTAGAACCCA
TATCGAGGCTATAATTCGTAAACAGGAAAGTCAAAAATGTAAATTTGATCGTCTCCTCCATGAAGATATTCATAGTTTGA
TTCAATCACCGAGCTTGGGTAATGATGAGTTGCTGATGTTATGGGGTCTCCTGAGAGATTATCGAAAAAATTTAATCAAT
GACCGACTTGAAAATATGAAAAATTGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comX/sigX | Streptococcus suis D9 |
72.603 |
82.955 |
0.602 |
| comX/sigX | Streptococcus suis isolate S10 |
71.233 |
82.955 |
0.591 |
| comX/sigX | Streptococcus suis P1/7 |
71.233 |
82.955 |
0.591 |