Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   OKL56_RS05325 Genome accession   NZ_CP109802
Coordinates   1117498..1118766 (+) Length   422 a.a.
NCBI ID   WP_081123317.1    Uniprot ID   -
Organism   Enterococcus hirae strain T16-1     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 1112498..1123766
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OKL56_RS05300 (OKL56_05300) tsf 1112892..1113773 (+) 882 WP_010718871.1 translation elongation factor Ts -
  OKL56_RS05305 (OKL56_05305) pyrH 1113995..1114717 (+) 723 WP_010718872.1 UMP kinase -
  OKL56_RS05310 (OKL56_05310) frr 1114721..1115278 (+) 558 WP_010737781.1 ribosome recycling factor -
  OKL56_RS05315 (OKL56_05315) - 1115508..1116317 (+) 810 WP_010718874.1 isoprenyl transferase -
  OKL56_RS05320 (OKL56_05320) - 1116314..1117114 (+) 801 WP_034866992.1 phosphatidate cytidylyltransferase -
  OKL56_RS05325 (OKL56_05325) eeP 1117498..1118766 (+) 1269 WP_081123317.1 RIP metalloprotease RseP Regulator
  OKL56_RS05330 (OKL56_05330) - 1118836..1120539 (+) 1704 WP_010718877.1 proline--tRNA ligase -
  OKL56_RS05335 (OKL56_05335) - 1120736..1121530 (-) 795 WP_264378939.1 SDR family NAD(P)-dependent oxidoreductase -
  OKL56_RS05340 (OKL56_05340) - 1121547..1122389 (-) 843 WP_010737777.1 aldo/keto reductase -
  OKL56_RS05345 (OKL56_05345) - 1122521..1122886 (+) 366 WP_010737776.1 helix-turn-helix domain-containing protein -

Sequence


Protein


Download         Length: 422 a.a.        Molecular weight: 46019.56 Da        Isoelectric Point: 5.4616

>NTDB_id=749340 OKL56_RS05325 WP_081123317.1 1117498..1118766(+) (eeP) [Enterococcus hirae strain T16-1]
MKTIITFIIVFGILVIVHEFGHFFFAKRSGILVREFAIGMGPKIYGHQAKDGTTYTLRLLPIGGYVRMAGNGDDETEMAP
GMPLSLLLNSDGIVEKINLSKKVQLTNSIPMELIRYDLEEELTITGYVNGEEEQEVTYSVAHDASIIEADGTELRIAPKD
VQFQSAKLWQRMLTNFAGPMNNFLLAILLFILLAFMHGGVQVTNTNQIGEVLPNGAAQTAGLKENDKILEINGNAIHSWG
DLTATITENPGKKLSVEVERNGQKQTLSVTPGVVESNGKKYGQLGIKAPMKTGFFDKIIGGTQQAFSSSLEIFKALGSLF
TNFSLNKLGGPVMMFQLSSEAADQGILTVISLMSILSMNLGIVNLLPIPALDGGKLVLNVVEGIRGKPISQEKEGFITLA
GFGLLMLLMVLVTWNDIQRFFF

Nucleotide


Download         Length: 1269 bp        

>NTDB_id=749340 OKL56_RS05325 WP_081123317.1 1117498..1118766(+) (eeP) [Enterococcus hirae strain T16-1]
ATGAAAACAATTATTACATTTATTATTGTTTTTGGCATTTTGGTCATTGTTCATGAATTTGGACACTTCTTCTTTGCGAA
ACGATCAGGAATTCTCGTTCGAGAGTTTGCAATTGGTATGGGACCCAAAATCTATGGGCATCAAGCTAAGGACGGAACTA
CCTATACACTACGTTTATTGCCAATCGGAGGTTATGTGAGGATGGCAGGAAACGGGGACGATGAAACAGAGATGGCTCCG
GGAATGCCGTTATCTCTTTTATTAAATTCTGATGGTATCGTAGAGAAAATCAATTTAAGTAAAAAAGTACAGCTTACAAA
TAGTATCCCGATGGAATTGATTCGTTATGATCTTGAAGAAGAATTAACGATTACTGGCTATGTCAATGGCGAGGAAGAAC
AAGAAGTGACTTATTCTGTCGCGCATGATGCTTCGATCATTGAAGCCGATGGCACAGAACTTCGAATCGCTCCAAAAGAC
GTGCAGTTCCAATCAGCCAAATTATGGCAACGAATGTTGACGAATTTCGCAGGACCAATGAATAATTTCTTGTTAGCTAT
TTTGTTATTTATTCTGCTTGCTTTTATGCATGGCGGAGTTCAAGTCACTAACACGAACCAAATTGGCGAAGTCTTACCTA
ATGGTGCAGCACAAACTGCTGGTTTAAAAGAAAATGATAAAATCTTGGAGATCAATGGTAATGCCATTCATTCTTGGGGA
GATCTAACGGCTACGATCACCGAGAATCCTGGGAAAAAACTCAGTGTTGAAGTCGAGCGCAATGGACAGAAACAAACCCT
TTCAGTAACACCAGGCGTGGTAGAATCGAATGGAAAAAAATATGGGCAATTAGGAATCAAAGCACCAATGAAAACGGGAT
TTTTTGACAAAATCATTGGAGGAACACAACAAGCTTTCAGTAGTTCATTAGAAATTTTTAAAGCACTAGGCTCATTATTT
ACAAACTTTAGTTTAAATAAATTGGGCGGTCCTGTAATGATGTTCCAATTATCTTCAGAAGCTGCAGATCAAGGAATATT
AACGGTCATTAGCTTGATGTCCATTCTTTCGATGAATTTGGGAATCGTTAACTTATTACCAATTCCAGCGCTTGACGGAG
GAAAGCTTGTCTTGAACGTCGTGGAAGGGATTCGTGGAAAACCAATCAGCCAAGAAAAAGAAGGCTTTATCACATTAGCA
GGCTTCGGTTTATTGATGCTTTTAATGGTATTAGTCACATGGAATGATATCCAACGATTCTTTTTCTAG

Domains


Predicted by InterproScan.

(6-408)

(199-270)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMD-9

56.776

100

0.576

  eeP Streptococcus thermophilus LMG 18311

56.542

100

0.573