Detailed information    

insolico Bioinformatically predicted

Overview

Name   phrC   Type   Regulator
Locus tag   L0P93_RS02355 Genome accession   NZ_CP109795
Coordinates   441670..441789 (+) Length   39 a.a.
NCBI ID   WP_003156334.1    Uniprot ID   I2C1C3
Organism   Bacillus velezensis strain B19     
Function   antagonize RapC (predicted from homology)   
Competence regulation

Genomic Context

Location: 436670..446789
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  L0P93_RS02340 (L0P93_02340) - 438282..438965 (+) 684 WP_014416901.1 response regulator transcription factor -
  L0P93_RS02345 (L0P93_02345) - 438952..440379 (+) 1428 WP_088056326.1 HAMP domain-containing sensor histidine kinase -
  L0P93_RS02350 (L0P93_02350) rapC 440538..441686 (+) 1149 WP_014304340.1 Rap family tetratricopeptide repeat protein Regulator
  L0P93_RS02355 (L0P93_02355) phrC 441670..441789 (+) 120 WP_003156334.1 PhrC/PhrF family phosphatase-inhibitory pheromone Regulator
  L0P93_RS02360 (L0P93_02360) - 441940..442035 (-) 96 WP_021495118.1 YjcZ family sporulation protein -
  L0P93_RS02365 (L0P93_02365) - 442130..443494 (-) 1365 WP_095273131.1 aspartate kinase -
  L0P93_RS02370 (L0P93_02370) ceuB 443908..444861 (+) 954 WP_015239156.1 ABC transporter permease Machinery gene
  L0P93_RS02375 (L0P93_02375) - 444851..445798 (+) 948 WP_014416905.1 iron chelate uptake ABC transporter family permease subunit -
  L0P93_RS02380 (L0P93_02380) - 445792..446550 (+) 759 WP_012116804.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 39 a.a.        Molecular weight: 4228.96 Da        Isoelectric Point: 8.0285

>NTDB_id=749216 L0P93_RS02355 WP_003156334.1 441670..441789(+) (phrC) [Bacillus velezensis strain B19]
MKLKSKWFVICLAAAAIFTVTGAGQTDQAEFHVAERGMT

Nucleotide


Download         Length: 120 bp        

>NTDB_id=749216 L0P93_RS02355 WP_003156334.1 441670..441789(+) (phrC) [Bacillus velezensis strain B19]
ATGAAATTGAAATCTAAATGGTTTGTTATTTGTTTAGCAGCCGCCGCGATTTTTACAGTGACAGGTGCAGGCCAGACAGA
TCAGGCTGAATTCCATGTAGCTGAAAGAGGAATGACGTGA

Domains

Predicted by InterproScan.

Rap-phr extracellular signalling (PhrC_PhrF)

(3-39)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB I2C1C3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  phrC Bacillus subtilis subsp. subtilis str. 168

70

100

0.718