Detailed information NTG0749108

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: OHJ31_RS04055
• Genome accession: NZ_CP109769
• Coordinates: 915339..916865 (-)
• Length: 508 a.a.
• NCBI ID: WP_181830529.1
• Uniprot ID: -
• Organism: Pectobacterium aroidearum strain B2-6
• Function: require for natural transformation (predicted from homology) Unclear

Genomic Context

Location: 910339..921865

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OHJ31_RS04030 (OHJ31_04015)	ytfR	910495..912015 (+)	1521	WP_350327338.1	galactofuranose ABC transporter, ATP-binding protein YtfR	-
OHJ31_RS04035 (OHJ31_04020)	ytfT	912002..913012 (+)	1011	WP_350327339.1	galactofuranose ABC transporter, ATP-binding protein YtfT	-
OHJ31_RS04040 (OHJ31_04025)	yjfF	913012..913974 (+)	963	WP_180779397.1	galactofuranose ABC transporter, permease protein YjfF	-
OHJ31_RS04045 (OHJ31_04030)	hdfR	913996..914823 (-)	828	WP_015842127.1	HTH-type transcriptional regulator HdfR	-
OHJ31_RS04050 (OHJ31_04035)	-	914944..915282 (+)	339	WP_014701822.1	DUF413 domain-containing protein	-
OHJ31_RS04055 (OHJ31_04040)	comM	915339..916865 (-)	1527	WP_181830529.1	YifB family Mg chelatase-like AAA ATPase	Machinery gene
OHJ31_RS04060 (OHJ31_04045)	ilvL	917273..917371 (+)	99	WP_071531109.1	ilv operon leader peptide	-
OHJ31_RS04065 (OHJ31_04050)	ilvG	917512..919158 (+)	1647	WP_225181799.1	acetolactate synthase 2 catalytic subunit	-
OHJ31_RS04070 (OHJ31_04055)	ilvM	919216..919476 (+)	261	WP_010294673.1	acetolactate synthase 2 small subunit	-
OHJ31_RS04075 (OHJ31_04060)	-	919503..920429 (+)	927	WP_181847983.1	branched-chain amino acid transaminase	-

Sequence

Protein

• Length: 508 a.a.
• Molecular weight: 55412.99 Da
• Isoelectric Point: 6.8238

>NTDB_id=749108 OHJ31_RS04055 WP_181830529.1 915339..916865(-) (comM) [Pectobacterium aroidearum strain B2-6]
MSLAVTYTRAMIGVQAPDVYIEVHISSGLPALTLVGLPETTVKEARDRVRSALINCGFTFPAKRITVNLAPADLPKEGGR
YDLPIALAILAASEQIDGEKLSRYEFLGELGLSGTLRGVNGAIPAALEAIKSGRQLILPDDNKREMTLIPQGEALMAGHL
LEVCAFLSGEEELLSCSDIALAPQSEEDALDLKDIIGQEQAKRALEIAAAGGHNLLLLGPPGTGKTMLASRLGNLMPPLS
DEEALESAAINSLINIDATMTRWRARPFRAPHHSSSMAALVGGGSLPKPGEISLAHNGVLFLDELPEFERRVLDSLREPL
ESGEIIISRTRAKVCYPARVQLVAAMNPSPSGHYQGIHNRLPAQQILRYLSKLSGPFLDRFDLSIEVPLLPPGVLSQQRH
QGESSATIRERVLIARQIQLKRANKINALLTSREIEQHCALEAPDAAYLEEVMNKLGLSVRAWHRILKVARTIADLGDRK
SIERKHIAEALSYRSMDRLLIQLHRSLE

Nucleotide

• Length: 1527 bp

>NTDB_id=749108 OHJ31_RS04055 WP_181830529.1 915339..916865(-) (comM) [Pectobacterium aroidearum strain B2-6]
ATGTCATTGGCAGTTACCTATACTCGAGCAATGATTGGCGTACAAGCGCCGGACGTTTATATCGAAGTTCACATCAGCAG
TGGGCTACCGGCCCTGACGCTAGTTGGCTTACCAGAAACTACCGTTAAGGAAGCGCGCGATCGCGTGCGCAGCGCACTCA
TCAATTGCGGATTTACCTTTCCAGCCAAGCGCATCACGGTCAACCTTGCTCCCGCAGACCTGCCAAAAGAAGGGGGACGC
TACGACCTGCCGATTGCTCTGGCGATTCTGGCAGCATCAGAACAAATCGATGGGGAAAAGCTAAGCCGCTACGAGTTTCT
TGGCGAATTAGGCCTGTCTGGCACGCTACGTGGCGTCAATGGCGCAATTCCCGCCGCACTGGAAGCCATAAAGTCAGGCC
GCCAGCTAATCCTGCCAGATGACAATAAACGGGAGATGACGCTGATACCGCAAGGTGAAGCGTTAATGGCTGGGCATTTG
TTGGAAGTGTGTGCTTTTCTCAGCGGGGAAGAGGAGTTACTCAGTTGCTCCGATATCGCACTGGCTCCGCAGTCAGAAGA
AGATGCACTCGACCTGAAGGATATCATCGGTCAGGAGCAGGCTAAACGCGCGTTGGAAATCGCGGCGGCTGGCGGTCACA
ATCTGCTATTGCTGGGGCCGCCGGGAACAGGGAAAACCATGCTGGCGAGCCGATTAGGCAATCTGATGCCGCCATTAAGC
GATGAAGAAGCGCTGGAAAGCGCCGCCATCAACAGCCTCATCAACATTGATGCCACCATGACGCGCTGGCGTGCCAGACC
GTTCAGAGCGCCTCACCACAGTTCTTCTATGGCCGCACTCGTGGGGGGAGGATCGTTGCCAAAACCCGGAGAAATCTCAC
TTGCTCACAACGGCGTGCTGTTTCTGGATGAATTACCGGAGTTTGAGCGACGCGTTCTGGATTCTCTACGAGAGCCTCTG
GAGTCCGGTGAAATTATCATTTCCCGGACGCGCGCCAAAGTGTGCTACCCGGCACGCGTGCAGCTCGTCGCTGCAATGAA
TCCCAGCCCATCAGGCCACTATCAAGGCATCCATAACCGCTTACCCGCACAACAAATACTGCGCTATCTCAGCAAACTTT
CCGGTCCCTTTTTGGATCGCTTTGACCTTTCGATCGAAGTTCCTTTGCTACCACCAGGGGTTTTATCTCAGCAACGTCAT
CAGGGAGAAAGCAGCGCAACAATTCGCGAGCGCGTGCTGATCGCACGGCAGATACAGCTGAAGCGGGCAAATAAAATCAA
CGCGCTGCTCACCTCACGAGAAATAGAACAACACTGTGCGTTAGAAGCGCCTGATGCGGCTTATCTGGAAGAAGTGATGA
ACAAACTCGGCTTATCCGTACGCGCCTGGCACAGGATATTGAAAGTCGCACGCACAATCGCTGACCTCGGCGATCGAAAG
AGCATAGAGAGAAAGCATATTGCCGAAGCACTGAGCTATCGCAGTATGGATCGATTGCTCATCCAGCTCCACAGAAGTCT
TGAATAG

Domains

Predicted by InterproScan.

• Magnesium chelatase, subunit ChlI C-terminal (Mg_chelatase_C) (402-494)

• Subunit ChlI of Mg-chelatase (ChlI) (21-142)

• Magnesium chelatase, subunit ChlI (Mg_chelatase) (191-390)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Haemophilus influenzae Rd KW20	63.834	99.606	0.636
comM	Vibrio cholerae strain A1552	63.817	99.016	0.632
comM	Glaesserella parasuis strain SC1401	63.116	99.803	0.63
comM	Vibrio campbellii strain DS40M4	62.648	99.606	0.624
comM	Legionella pneumophila str. Paris	50.499	98.622	0.498
comM	Legionella pneumophila strain ERS1305867	50.499	98.622	0.498
RA0C_RS07335	Riemerella anatipestifer ATCC 11845 = DSM 15868	47.337	99.803	0.472