Detailed information
Bioinformatically predicted
Overview
| Name | pilV | Type | Machinery gene |
| Locus tag | OBG92_RS25220 | Genome accession | NZ_CP109657 |
| Coordinates | 5331193..5331750 (+) | Length | 185 a.a. |
| NCBI ID | WP_034081446.1 | Uniprot ID | E9KTN1 |
| Organism | Pseudomonas aeruginosa strain Zw26 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 5326193..5336750
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OBG92_RS25200 (OBG92_04963) | pilR | 5327469..5328806 (+) | 1338 | WP_264315614.1 | two-component system response regulator PilR | Regulator |
| OBG92_RS25205 (OBG92_04964) | thiO | 5328852..5329946 (-) | 1095 | WP_058146146.1 | glycine oxidase ThiO | - |
| OBG92_RS25210 (OBG92_04965) | - | 5330081..5330590 (+) | 510 | WP_003150026.1 | GspH/FimT family protein | - |
| OBG92_RS25215 (OBG92_04966) | - | 5330696..5331202 (+) | 507 | WP_012077308.1 | Tfp pilus assembly protein FimT/FimU | - |
| OBG92_RS25220 (OBG92_04967) | pilV | 5331193..5331750 (+) | 558 | WP_034081446.1 | type IV pilus modification protein PilV | Machinery gene |
| OBG92_RS25225 (OBG92_04968) | pilW | 5331747..5332571 (+) | 825 | WP_034081447.1 | type 4a pilus minor pilin PilW | - |
| OBG92_RS25230 (OBG92_04969) | pilX | 5332568..5333155 (+) | 588 | WP_256157942.1 | type 4a pilus minor pilin PilX | - |
| OBG92_RS25235 (OBG92_04970) | pilY1 | 5333167..5336634 (+) | 3468 | WP_034081450.1 | type 4a pilus biogenesis protein PilY1 | - |
Sequence
Protein
Download Length: 185 a.a. Molecular weight: 19985.21 Da Isoelectric Point: 8.2269
>NTDB_id=748822 OBG92_RS25220 WP_034081446.1 5331193..5331750(+) (pilV) [Pseudomonas aeruginosa strain Zw26]
MLLKLPRKPLRESGFSLIEVLVALLLVSIGVLGMIAMQGKTIQYTADSVERNKAAMLGSNLLESMRASPKALYDVKDQMA
TQSDFFKAKGSAFPTAPSSCTPLPDAVKDRLGCWAEQVKKELPGAADLLNSEFYICRSSKPGDCDGKGSMLEIRLAWRGK
QGACVNPADSGADTSLCHYTLRVEP
MLLKLPRKPLRESGFSLIEVLVALLLVSIGVLGMIAMQGKTIQYTADSVERNKAAMLGSNLLESMRASPKALYDVKDQMA
TQSDFFKAKGSAFPTAPSSCTPLPDAVKDRLGCWAEQVKKELPGAADLLNSEFYICRSSKPGDCDGKGSMLEIRLAWRGK
QGACVNPADSGADTSLCHYTLRVEP
Nucleotide
Download Length: 558 bp
>NTDB_id=748822 OBG92_RS25220 WP_034081446.1 5331193..5331750(+) (pilV) [Pseudomonas aeruginosa strain Zw26]
ATGCTATTGAAACTCCCGCGCAAACCGCTGCGCGAATCCGGCTTCAGCCTGATCGAAGTGCTGGTCGCCCTGCTGCTGGT
CAGCATCGGCGTGCTGGGCATGATCGCCATGCAGGGCAAGACCATCCAGTACACCGCCGACTCGGTGGAGCGCAACAAGG
CCGCGATGCTCGGCAGCAACCTGCTGGAAAGCATGCGGGCAAGCCCCAAGGCCCTGTACGACGTCAAGGACCAGATGGCC
ACGCAATCCGACTTCTTCAAGGCCAAGGGGTCGGCGTTCCCCACCGCGCCCTCCTCCTGCACGCCATTGCCCGACGCGGT
GAAGGACCGCCTGGGCTGCTGGGCGGAACAGGTGAAGAAGGAATTGCCGGGAGCCGCGGACCTGCTGAACAGCGAGTTCT
ACATCTGCCGCAGTTCGAAGCCGGGCGATTGCGACGGCAAGGGCTCGATGCTGGAGATCCGCCTCGCCTGGCGCGGCAAG
CAGGGCGCCTGCGTCAACCCCGCCGACAGCGGCGCCGACACCTCCCTCTGCCATTACACCCTCAGGGTCGAGCCATGA
ATGCTATTGAAACTCCCGCGCAAACCGCTGCGCGAATCCGGCTTCAGCCTGATCGAAGTGCTGGTCGCCCTGCTGCTGGT
CAGCATCGGCGTGCTGGGCATGATCGCCATGCAGGGCAAGACCATCCAGTACACCGCCGACTCGGTGGAGCGCAACAAGG
CCGCGATGCTCGGCAGCAACCTGCTGGAAAGCATGCGGGCAAGCCCCAAGGCCCTGTACGACGTCAAGGACCAGATGGCC
ACGCAATCCGACTTCTTCAAGGCCAAGGGGTCGGCGTTCCCCACCGCGCCCTCCTCCTGCACGCCATTGCCCGACGCGGT
GAAGGACCGCCTGGGCTGCTGGGCGGAACAGGTGAAGAAGGAATTGCCGGGAGCCGCGGACCTGCTGAACAGCGAGTTCT
ACATCTGCCGCAGTTCGAAGCCGGGCGATTGCGACGGCAAGGGCTCGATGCTGGAGATCCGCCTCGCCTGGCGCGGCAAG
CAGGGCGCCTGCGTCAACCCCGCCGACAGCGGCGCCGACACCTCCCTCTGCCATTACACCCTCAGGGTCGAGCCATGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilV | Pseudomonas aeruginosa PAK |
90.27 |
100 |
0.903 |