Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   N8A73_RS05120 Genome accession   NZ_CP109651
Coordinates   1012548..1013498 (+) Length   316 a.a.
NCBI ID   WP_041117046.1    Uniprot ID   -
Organism   Bacillus safensis strain LG01     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1007548..1018498
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  N8A73_RS05095 comK 1007901..1008479 (+) 579 WP_034282183.1 competence protein ComK Regulator
  N8A73_RS05100 - 1008778..1009260 (+) 483 WP_034282182.1 hypothetical protein -
  N8A73_RS05105 - 1009292..1010731 (-) 1440 WP_034282181.1 PLP-dependent aminotransferase family protein -
  N8A73_RS05110 - 1010877..1012046 (+) 1170 WP_034282180.1 MFS transporter -
  N8A73_RS05115 - 1012112..1012387 (+) 276 WP_041117044.1 barstar family protein -
  N8A73_RS05120 ceuB 1012548..1013498 (+) 951 WP_041117046.1 ABC transporter permease Machinery gene
  N8A73_RS05125 - 1013491..1014441 (+) 951 WP_041117048.1 iron chelate uptake ABC transporter family permease subunit -
  N8A73_RS05130 - 1014432..1015190 (+) 759 WP_034282171.1 ABC transporter ATP-binding protein -
  N8A73_RS05135 - 1015212..1016156 (+) 945 WP_061109638.1 siderophore ABC transporter substrate-binding protein -
  N8A73_RS05140 - 1016296..1017249 (+) 954 WP_034282168.1 LCP family protein -
  N8A73_RS05145 - 1017318..1017680 (-) 363 WP_264316072.1 hypothetical protein -
  N8A73_RS05150 - 1017837..1018454 (+) 618 WP_024425492.1 TVP38/TMEM64 family protein -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34905.23 Da        Isoelectric Point: 9.6338

>NTDB_id=748724 N8A73_RS05120 WP_041117046.1 1012548..1013498(+) (ceuB) [Bacillus safensis strain LG01]
MKLYQLSLLFVCLACISLFVGVQDLSILELFHLTDEQVHTLVSSRLPRLVSIVLAGMSLSLCGFIMQSMTRNKFVSPTTA
GTMDWAKLGILAAMLVFTHANPLMKMGIAFLFTLAGNLLFLKILRHIKVNDTIYVPLVGLMFGGIVSSISTFIAYKYDLI
QNVSAWLQGDFSLIVQGRYELLYVSVPLLIIAYLYADRFTVAGMGESFAVNLGLTYKRVMAVGLVIVSMITSVTILTVGM
LPFLGLIIPNIVSIYRGDHLKKSLPHTALLGAIFVLICDVLGRVIIYPYEISVGLMVGIIGSAIFLYMLLRRKRYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=748724 N8A73_RS05120 WP_041117046.1 1012548..1013498(+) (ceuB) [Bacillus safensis strain LG01]
ATGAAGTTGTATCAATTAAGTTTGTTATTTGTATGTTTGGCATGTATATCTCTGTTTGTCGGTGTACAGGATCTGTCCAT
TTTAGAACTGTTTCATTTAACAGATGAACAAGTGCACACGTTAGTTTCAAGCCGCCTCCCGCGTCTCGTGAGTATTGTGC
TGGCTGGTATGAGCCTTAGTTTATGCGGCTTTATTATGCAAAGCATGACGAGGAATAAATTTGTTTCACCAACCACTGCA
GGAACGATGGATTGGGCGAAGCTTGGTATTTTAGCAGCAATGCTTGTTTTTACACATGCGAATCCGCTTATGAAAATGGG
GATTGCGTTTCTATTTACTTTAGCTGGAAATCTTCTTTTCTTAAAAATCCTGCGGCATATCAAGGTGAACGATACGATTT
ATGTACCATTAGTCGGCTTAATGTTTGGGGGGATTGTCAGTTCAATATCTACGTTTATAGCCTATAAATATGATTTGATC
CAAAACGTATCCGCATGGCTTCAAGGGGATTTTTCTCTTATTGTCCAAGGGCGTTATGAACTGCTCTATGTGAGCGTTCC
ACTATTGATCATTGCGTATTTATATGCTGACCGCTTTACAGTGGCAGGCATGGGCGAGAGCTTTGCTGTCAACTTAGGTT
TAACGTATAAACGTGTGATGGCAGTTGGTTTGGTGATCGTTTCAATGATTACGTCTGTCACCATTTTAACTGTCGGGATG
CTGCCATTCCTTGGATTAATCATTCCGAATATTGTTTCGATCTACCGCGGCGATCACTTGAAAAAAAGCCTCCCGCATAC
AGCTTTACTAGGAGCTATTTTTGTTCTGATTTGTGATGTGCTCGGAAGGGTGATCATTTATCCATATGAAATATCAGTTG
GGCTCATGGTAGGCATCATCGGGAGTGCGATCTTCCTGTACATGTTATTAAGGAGGAAACGCTATGCATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(10-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

51.495

95.253

0.491