Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | F6Y14_RS14025 | Genome accession | NZ_AP020322 |
| Coordinates | 2756633..2757028 (+) | Length | 131 a.a. |
| NCBI ID | WP_000932694.1 | Uniprot ID | - |
| Organism | Staphylococcus aureus strain KUH180129 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 2751633..2762028
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| F6Y14_RS13995 (KUH180129_2621) | - | 2752892..2753296 (+) | 405 | WP_001094394.1 | F0F1 ATP synthase subunit epsilon | - |
| F6Y14_RS14000 | - | 2753634..2753726 (+) | 93 | WP_001790611.1 | hypothetical protein | - |
| F6Y14_RS14005 (KUH180129_2622) | - | 2753858..2754091 (+) | 234 | WP_000384523.1 | DUF1146 family protein | - |
| F6Y14_RS14010 (KUH180129_2623) | murA | 2754202..2755467 (+) | 1266 | WP_000358006.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| F6Y14_RS14015 (KUH180129_2624) | fabZ | 2755501..2755941 (+) | 441 | WP_000447678.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| F6Y14_RS14020 (KUH180129_2625) | - | 2755999..2756439 (-) | 441 | WP_000846746.1 | YwpF-like family protein | - |
| F6Y14_RS14025 (KUH180129_2626) | ssb | 2756633..2757028 (+) | 396 | WP_000932694.1 | single-stranded DNA-binding protein | Machinery gene |
| F6Y14_RS14030 (KUH180129_2627) | sceD | 2757417..2758112 (+) | 696 | WP_000752005.1 | lytic transglycosylase SceD | - |
| F6Y14_RS14035 (KUH180129_2628) | tenA | 2758499..2759188 (+) | 690 | WP_000396077.1 | thiaminase II | - |
| F6Y14_RS14040 (KUH180129_2629) | thiD | 2759181..2760011 (+) | 831 | WP_000594954.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| F6Y14_RS14045 (KUH180129_2630) | thiM | 2759995..2760786 (+) | 792 | WP_001108483.1 | hydroxyethylthiazole kinase | - |
| F6Y14_RS14050 (KUH180129_2631) | thiE | 2760788..2761429 (+) | 642 | WP_000483153.1 | thiamine phosphate synthase | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 15042.09 Da Isoelectric Point: 5.6824
>NTDB_id=74824 F6Y14_RS14025 WP_000932694.1 2756633..2757028(+) (ssb) [Staphylococcus aureus strain KUH180129]
MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
Nucleotide
Download Length: 396 bp
>NTDB_id=74824 F6Y14_RS14025 WP_000932694.1 2756633..2757028(+) (ssb) [Staphylococcus aureus strain KUH180129]
ATGCTAAATAAAATCGTAATTGTCGGGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
ATGCTAAATAAAATCGTAATTGTCGGGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Staphylococcus aureus N315 |
100 |
100 |
1 |
| ssb | Staphylococcus aureus MW2 |
99.237 |
100 |
0.992 |