Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | QAO23_RS05880 | Genome accession | NZ_CP123130 |
| Coordinates | 1230432..1230827 (+) | Length | 131 a.a. |
| NCBI ID | WP_000932694.1 | Uniprot ID | Q2FWF7 |
| Organism | Staphylococcus aureus strain GE-MSSA29 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 1225432..1235827
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QAO23_RS05850 (QAO23_05860) | - | 1225452..1225685 (+) | 234 | WP_000384520.1 | DUF1146 family protein | - |
| QAO23_RS05855 (QAO23_05865) | murA | 1225796..1227061 (+) | 1266 | WP_000358002.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| QAO23_RS05860 (QAO23_05870) | fabZ | 1227095..1227535 (+) | 441 | WP_000447678.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| QAO23_RS05865 (QAO23_05875) | - | 1227592..1228032 (-) | 441 | WP_000846746.1 | YwpF-like family protein | - |
| QAO23_RS05870 (QAO23_05880) | istA | 1228243..1229535 (+) | 1293 | WP_000777467.1 | IS21 family transposase | - |
| QAO23_RS05875 (QAO23_05885) | istB | 1229528..1230289 (+) | 762 | WP_001066124.1 | IS21-like element helper ATPase IstB | - |
| QAO23_RS05880 (QAO23_05890) | ssb | 1230432..1230827 (+) | 396 | WP_000932694.1 | single-stranded DNA-binding protein | Machinery gene |
| QAO23_RS05885 (QAO23_05895) | sceD | 1231216..1231911 (+) | 696 | WP_000751997.1 | lytic transglycosylase SceD | - |
| QAO23_RS05890 (QAO23_05900) | tenA | 1232299..1232988 (+) | 690 | WP_000396067.1 | thiaminase II | - |
| QAO23_RS05895 (QAO23_05905) | thiD | 1232981..1233811 (+) | 831 | WP_000594943.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| QAO23_RS05900 (QAO23_05910) | thiM | 1233795..1234586 (+) | 792 | WP_001108486.1 | hydroxyethylthiazole kinase | - |
| QAO23_RS05905 (QAO23_05915) | thiE | 1234588..1235229 (+) | 642 | WP_000483147.1 | thiamine phosphate synthase | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 15042.09 Da Isoelectric Point: 5.6824
>NTDB_id=747771 QAO23_RS05880 WP_000932694.1 1230432..1230827(+) (ssb) [Staphylococcus aureus strain GE-MSSA29]
MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
Nucleotide
Download Length: 396 bp
>NTDB_id=747771 QAO23_RS05880 WP_000932694.1 1230432..1230827(+) (ssb) [Staphylococcus aureus strain GE-MSSA29]
ATGCTAAATAAAATCGTAATTGTCGGGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
ATGCTAAATAAAATCGTAATTGTCGGGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Staphylococcus aureus N315 |
100 |
100 |
1 |
| ssb | Staphylococcus aureus MW2 |
99.237 |
100 |
0.992 |