Detailed information    

insolico Bioinformatically predicted

Overview


Name   coiA   Type   Machinery gene
Locus tag   F6Y17_RS06005 Genome accession   NZ_AP020320
Coordinates   1147864..1148850 (-) Length   328 a.a.
NCBI ID   WP_000959282.1    Uniprot ID   A0A7U7EXT8
Organism   Staphylococcus aureus strain KUH180062     
Function   require for natural transformation (predicted from homology)   
Unclear

Genomic Context


Location: 1142864..1153850
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  F6Y17_RS05980 (KUH180062_1116) - 1143124..1143471 (-) 348 WP_001242103.1 hypothetical protein -
  F6Y17_RS05985 (KUH180062_1117) - 1143657..1144250 (+) 594 WP_000224619.1 CYTH domain-containing protein -
  F6Y17_RS05990 (KUH180062_1118) - 1144354..1144719 (+) 366 WP_000214070.1 truncated hemoglobin YjbI -
  F6Y17_RS05995 (KUH180062_1119) yjbH 1144742..1145548 (+) 807 WP_150030558.1 protease adaptor protein YjbH -
  F6Y17_RS06000 (KUH180062_1120) pepF 1146008..1147816 (-) 1809 WP_000082725.1 oligoendopeptidase F -
  F6Y17_RS06005 (KUH180062_1121) coiA 1147864..1148850 (-) 987 WP_000959282.1 competence protein CoiA Machinery gene
  F6Y17_RS06010 (KUH180062_1122) mecA 1148971..1149690 (-) 720 WP_001217728.1 adaptor protein MecA -
  F6Y17_RS06015 (KUH180062_1123) spxA 1150061..1150456 (-) 396 WP_000258003.1 transcriptional regulator SpxA -
  F6Y17_RS06020 (KUH180062_1124) trpS 1150750..1151739 (+) 990 WP_000448934.1 tryptophan--tRNA ligase -
  F6Y17_RS06025 (KUH180062_1125) opp4C 1151781..1152662 (-) 882 WP_001180280.1 oligopeptide ABC transporter permease -
  F6Y17_RS06030 (KUH180062_1126) opp4B 1152674..1153636 (-) 963 WP_000915997.1 oligopeptide ABC transporter permease -

Sequence


Protein


Download         Length: 328 a.a.        Molecular weight: 38878.55 Da        Isoelectric Point: 9.5714

>NTDB_id=74766 F6Y17_RS06005 WP_000959282.1 1147864..1148850(-) (coiA) [Staphylococcus aureus strain KUH180062]
MLVALNEEKERVLATTALRKTQYFCPVCGKQVILKRGLKVISHFAHKHLAEQKCFNNETIKHYKSKLILAQMIQQQGCKV
EIEPFLKEIKQIPDILINNKYVIELQYSPIPYKQILQRTEGLKKMGYKVSWLLNDVDYCHNKVKFNHFHSLFINPITRKL
HTFNLEKKQIMMFQQIQYLGGHKYVAEKRNAKIIELFNEAPCDYHAVYKLSKFAINQYIKYCRWQNSVLEPTLSAMYQLQ
LTDQEVVYNYGYIFPEQIYIENHPIEWQLQVDLWLKNGKSKLVNDNLNYFKLKKFIVALESKTAIIEKLINNYLNICSDR
GNDVQILF

Nucleotide


Download         Length: 987 bp        

>NTDB_id=74766 F6Y17_RS06005 WP_000959282.1 1147864..1148850(-) (coiA) [Staphylococcus aureus strain KUH180062]
ATGTTAGTAGCTTTAAATGAAGAAAAGGAACGTGTGTTAGCAACTACTGCATTGAGAAAGACACAATATTTTTGTCCTGT
GTGTGGCAAGCAAGTTATTTTAAAGCGTGGGCTCAAAGTAATTAGTCATTTTGCACATAAACATTTAGCGGAACAAAAAT
GTTTTAATAATGAAACGATTAAACATTATAAAAGTAAATTGATTTTAGCACAGATGATACAGCAACAAGGATGTAAAGTA
GAGATAGAGCCATTTTTAAAAGAAATAAAACAAATTCCGGATATTTTGATTAATAATAAATATGTTATTGAGCTACAGTA
TTCGCCAATTCCTTATAAACAGATTCTTCAACGAACGGAAGGTTTAAAGAAAATGGGATATAAAGTAAGTTGGTTATTAA
ATGATGTTGATTATTGTCATAATAAAGTGAAGTTCAATCATTTTCATAGTTTGTTTATTAATCCAATCACTCGAAAACTT
CATACGTTCAATTTAGAGAAAAAACAAATAATGATGTTTCAACAAATACAATATTTAGGCGGGCACAAATATGTCGCTGA
AAAAAGGAATGCCAAAATTATTGAGTTGTTTAATGAGGCGCCTTGTGATTATCATGCTGTTTATAAATTATCAAAGTTCG
CAATTAATCAATATATCAAATATTGTCGCTGGCAAAATTCTGTTTTAGAACCCACTTTAAGTGCAATGTATCAATTACAG
TTAACTGATCAAGAAGTAGTGTACAATTATGGTTATATTTTTCCAGAGCAAATTTATATTGAAAATCATCCAATTGAGTG
GCAATTACAAGTTGATTTATGGTTAAAGAATGGAAAAAGCAAATTAGTAAATGACAATCTTAATTATTTTAAACTGAAAA
AATTTATTGTTGCTCTAGAAAGTAAAACAGCAATTATAGAAAAACTTATTAACAATTATTTAAATATTTGTTCAGATAGA
GGTAATGACGTGCAAATTTTGTTCTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A7U7EXT8

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Staphylococcus aureus N315

100

100

1

  coiA Staphylococcus aureus MW2

97.561

100

0.976


Multiple sequence alignment