Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | F6Y18_RS13260 | Genome accession | NZ_AP020316 |
| Coordinates | 2645289..2645684 (+) | Length | 131 a.a. |
| NCBI ID | WP_000932694.1 | Uniprot ID | - |
| Organism | Staphylococcus aureus strain KUH140331 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 2640289..2650684
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| F6Y18_RS13230 (KUH140331_2468) | - | 2641491..2641895 (+) | 405 | WP_001094394.1 | F0F1 ATP synthase subunit epsilon | - |
| F6Y18_RS13235 | - | 2642290..2642382 (+) | 93 | WP_001790611.1 | hypothetical protein | - |
| F6Y18_RS13240 (KUH140331_2469) | - | 2642514..2642747 (+) | 234 | WP_000384523.1 | DUF1146 family protein | - |
| F6Y18_RS13245 (KUH140331_2470) | murA | 2642858..2644123 (+) | 1266 | WP_000358006.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| F6Y18_RS13250 (KUH140331_2471) | fabZ | 2644157..2644597 (+) | 441 | WP_000447678.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| F6Y18_RS13255 (KUH140331_2472) | - | 2644655..2645095 (-) | 441 | WP_000846746.1 | YwpF-like family protein | - |
| F6Y18_RS13260 (KUH140331_2473) | ssb | 2645289..2645684 (+) | 396 | WP_000932694.1 | single-stranded DNA-binding protein | Machinery gene |
| F6Y18_RS13265 (KUH140331_2474) | sceD | 2646073..2646768 (+) | 696 | WP_117185860.1 | lytic transglycosylase SceD | - |
| F6Y18_RS13270 (KUH140331_2475) | tenA | 2647154..2647843 (+) | 690 | WP_000396067.1 | thiaminase II | - |
| F6Y18_RS13275 (KUH140331_2476) | thiD | 2647836..2648666 (+) | 831 | WP_000594960.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| F6Y18_RS13280 (KUH140331_2477) | thiM | 2648650..2649441 (+) | 792 | WP_001108482.1 | hydroxyethylthiazole kinase | - |
| F6Y18_RS13285 (KUH140331_2478) | thiE | 2649443..2650084 (+) | 642 | WP_000483156.1 | thiamine phosphate synthase | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 15042.09 Da Isoelectric Point: 5.6824
>NTDB_id=74695 F6Y18_RS13260 WP_000932694.1 2645289..2645684(+) (ssb) [Staphylococcus aureus strain KUH140331]
MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
Nucleotide
Download Length: 396 bp
>NTDB_id=74695 F6Y18_RS13260 WP_000932694.1 2645289..2645684(+) (ssb) [Staphylococcus aureus strain KUH140331]
ATGCTAAATAAAATCGTAATTGTCGGGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
ATGCTAAATAAAATCGTAATTGTCGGGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Staphylococcus aureus N315 |
100 |
100 |
1 |
| ssb | Staphylococcus aureus MW2 |
99.237 |
100 |
0.992 |