Detailed information NTG0074208

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: GL2_RS03785
• Genome accession: NZ_AP019807
• Coordinates: 852688..854097 (+)
• Length: 469 a.a.
• NCBI ID: WP_143729373.1
• Uniprot ID: A0A510IP50
• Organism: Microbulbifer sp. GL-2
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 847688..859097

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GL2_RS03770 (GL2_07730)	-	848246..849196 (+)	951	WP_232053757.1	outer membrane protein assembly factor BamD	-
GL2_RS03775 (GL2_07740)	-	849255..850883 (-)	1629	WP_172621047.1	NAD+ synthase	-
GL2_RS03780 (GL2_07750)	-	850976..852556 (+)	1581	WP_143729372.1	ATP-binding protein	-
GL2_RS03785 (GL2_07760)	pilR	852688..854097 (+)	1410	WP_143729373.1	sigma-54 dependent transcriptional regulator	Regulator
GL2_RS03790 (GL2_07770)	-	854202..854633 (-)	432	WP_143729374.1	type IV pilin protein	-
GL2_RS03795 (GL2_07780)	-	854646..858065 (-)	3420	WP_143729375.1	pilus assembly protein	-
GL2_RS03800 (GL2_07790)	-	858072..858617 (-)	546	WP_143729376.1	PilX N-terminal domain-containing pilus assembly protein	-

Sequence

Protein

• Length: 469 a.a.
• Molecular weight: 52478.97 Da
• Isoelectric Point: 6.3584

>NTDB_id=74208 GL2_RS03785 WP_143729373.1 852688..854097(+) (pilR) [Microbulbifer sp. GL-2]
MLPLALVVDDEPDICKLLTLTLQRMDVDCHTAANLAEAKRLLTQNRYDFCLTDLRLPDGDGLQLVEHIQSGIHRELPIAV
ITAHGNMDTAIKALKLGAFDFVSKPVDLERLRNLAQLALRLNQDQEGDSNQSSVSKHLLLGEADNMRRLREQIAKVARSD
APVYISGESGSGKELAARAIHAQGARADKPFVPVNCGAIPNELMESEFFGHKKGSFTGAHKDKLGLLQSAQGGTLFLDEV
ADLPLEMQVKLLRAIQEKRIRPIGASQETPIDVRILSATHKDLGKEVSEGRFRNDLYYRINVIEISTPPLRERISDIPLL
IDAIMQRIAKNSGINPPRITDKALEALQSYSFPGNVRQLENILERAFTLCERQEILCDDLFLERNEQPHKIDAAKNISVA
ALPQEQSQENNRFDPSQYTSLDEFLQDIEKEAIESALTKTRWNRTAAAQKLGISFRSLRYRLKKLGLET

Nucleotide

• Length: 1410 bp

>NTDB_id=74208 GL2_RS03785 WP_143729373.1 852688..854097(+) (pilR) [Microbulbifer sp. GL-2]
ATGCTACCTCTGGCCCTGGTTGTCGACGACGAACCGGATATTTGCAAGCTACTCACCCTCACGCTGCAGCGCATGGATGT
GGACTGCCATACCGCAGCCAATCTCGCAGAAGCAAAGAGGCTACTCACACAAAATCGCTATGATTTTTGCCTTACAGACC
TGCGTCTCCCTGATGGGGATGGTCTCCAGCTGGTTGAGCATATTCAGTCCGGTATACACCGGGAATTACCCATAGCCGTT
ATCACCGCGCACGGTAATATGGATACTGCAATCAAAGCACTGAAACTTGGTGCCTTTGACTTCGTCAGTAAACCCGTTGA
CCTTGAGCGACTGCGTAACCTTGCCCAACTCGCCCTGCGCCTAAATCAAGATCAGGAAGGAGATAGTAATCAAAGTAGCG
TCAGCAAGCACTTGCTTTTGGGTGAGGCCGATAATATGCGTAGGCTACGAGAGCAAATCGCTAAAGTGGCACGCAGTGAT
GCACCAGTCTATATCAGTGGGGAATCTGGTTCCGGTAAAGAGCTGGCTGCTCGTGCAATTCATGCACAAGGGGCTCGGGC
AGATAAGCCGTTTGTACCTGTTAACTGTGGCGCCATACCAAATGAACTAATGGAAAGCGAGTTTTTTGGTCACAAAAAAG
GCAGTTTCACTGGAGCCCATAAAGATAAATTAGGCCTTTTGCAAAGTGCTCAAGGTGGTACTTTGTTTTTAGATGAGGTT
GCAGACCTGCCACTTGAAATGCAGGTCAAACTACTCCGCGCGATACAGGAGAAGCGCATTCGACCTATTGGAGCAAGCCA
GGAAACTCCTATTGATGTGCGTATTCTCAGCGCAACTCATAAAGATCTTGGCAAAGAAGTAAGTGAGGGAAGGTTTCGCA
ACGATTTATACTATCGTATTAATGTAATTGAGATTTCCACACCACCACTTCGCGAGCGCATAAGTGATATTCCATTACTG
ATTGATGCAATTATGCAGCGTATTGCAAAAAACTCCGGGATTAACCCACCCAGAATTACGGATAAGGCTCTAGAGGCTCT
GCAGAGCTATTCTTTTCCTGGCAATGTGCGCCAGTTGGAAAACATTCTTGAGCGAGCCTTCACCCTATGTGAACGACAAG
AAATTCTCTGTGATGACCTTTTCCTAGAACGTAACGAGCAACCGCATAAAATAGATGCAGCTAAAAATATTTCAGTAGCA
GCCCTCCCCCAAGAACAATCTCAAGAAAACAATAGATTCGATCCCAGTCAGTACACTTCCCTGGATGAGTTTCTTCAAGA
TATTGAAAAAGAAGCGATTGAAAGCGCGCTAACAAAAACTCGCTGGAATCGAACTGCTGCCGCTCAGAAACTGGGCATCA
GCTTCAGATCCCTGCGATACAGGTTAAAGAAATTAGGTTTGGAAACATGA

Domains

Predicted by InterproScan.

• Sigma-54 interaction domain (Sigma54_activat) (140-305)

• Response regulator receiver domain (Response_reg) (6-114)

• Bacterial regulatory protein, Fis family (HTH_8) (425-465)

3D structure

• AlphaFold DB: A0A510IP50

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Pseudomonas aeruginosa PAK	59.483	98.934	0.588
pilR	Acinetobacter baumannii strain A118	50.743	100	0.51