Detailed information NTG0074175

Bioinformatically predicted

Overview

• Name: pilQ
• Type: Machinery gene
• Locus tag: TthHC11_RS07425
• Genome accession: NZ_AP019801
• Coordinates: 1387669..1389942 (+)
• Length: 757 a.a.
• NCBI ID: WP_143591393.1
• Uniprot ID: -
• Organism: Thermus thermophilus strain HC11
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1382669..1394942

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
TthHC11_RS07395 (TthHC11_14390)	-	1382792..1383283 (+)	492	WP_011173430.1	DUF5317 domain-containing protein	-
TthHC11_RS07400 (TthHC11_14400)	-	1383338..1384342 (+)	1005	WP_011173431.1	homoisocitrate dehydrogenase	-
TthHC11_RS07405 (TthHC11_14410)	pilM	1384477..1385610 (+)	1134	WP_143591386.1	type IV pilus assembly protein PilM	Machinery gene
TthHC11_RS07410 (TthHC11_14420)	pilN	1385603..1386226 (+)	624	WP_011173433.1	competence protein	Machinery gene
TthHC11_RS07415 (TthHC11_14430)	pilO	1386216..1386797 (+)	582	WP_143591389.1	type 4a pilus biogenesis protein PilO	Machinery gene
TthHC11_RS07420 (TthHC11_14440)	pilW	1386794..1387672 (+)	879	WP_143591391.1	competence protein	Machinery gene
TthHC11_RS07425 (TthHC11_14450)	pilQ	1387669..1389942 (+)	2274	WP_143591393.1	secretin N-terminal domain-containing protein	Machinery gene
TthHC11_RS07430 (TthHC11_14460)	aroC	1390001..1391152 (+)	1152	WP_143591395.1	chorismate synthase	-
TthHC11_RS07435 (TthHC11_14470)	-	1391177..1391731 (+)	555	WP_008632876.1	shikimate kinase	-
TthHC11_RS07440 (TthHC11_14480)	-	1391709..1392755 (+)	1047	WP_011228641.1	3-dehydroquinate synthase family protein	-
TthHC11_RS07445 (TthHC11_14490)	rsmF	1392801..1394171 (-)	1371	WP_143591397.1	16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF	-
TthHC11_RS07450 (TthHC11_14500)	-	1394224..1394601 (+)	378	WP_024119442.1	4'-phosphopantetheinyl transferase superfamily protein	-
TthHC11_RS07455 (TthHC11_14510)	-	1394579..1394932 (-)	354	WP_011228643.1	DUF4870 domain-containing protein	-

Sequence

Protein

• Length: 757 a.a.
• Molecular weight: 82651.73 Da
• Isoelectric Point: 5.1344

>NTDB_id=74175 TthHC11_RS07425 WP_143591393.1 1387669..1389942(+) (pilQ) [Thermus thermophilus strain HC11]
MKSTWIRAAVIALAGLGAFALAGSFPEELRFQAPVNLKVSESQVKAGQTLPLDVVLEALARSVGLQPLIYRAYDPSGDPA
KAQPPLPNIKLDFQGKPFREVWDLLFATYGNQYSLDYLFLPPDVVVVAPTQVITALVDAPSRTGAMERRPYIVGIPEIAY
KRTETDAQGQPRTVVNIEGAKAWVQNDLLPFLSREAAGLNVNWIVVEEGGRLKAVLSVLATPEQHARFSDILQRAGIDFR
PLPALAQPKPRVEKTYTLTYATFPELLAFLQSRLPEAQISVVPTNPQRAIVLATEEDHARLSELLKTADVPKTVRRVYAL
QNLTFAEAQERLKPLLEKDLKGARLESLPGNPKALLLEAPEAEHALFAEILKALDVPPQAPQAPQEATLRRLYPLRYANA
EQVAPFLAREVPGIVVQTVPGQPVLSVRGTEAQLGEVESLLAQIDRAPEQGPPVFQRAYQLSNAKAVELAQVLQEALKAR
QAQNQGQQNQALPTREATVVADPRTNTLIVTGTQEDLALVEGLIPKLDQPVPQVSLRVRIQEVQSNLTRSLGLKWNSIAG
GNVAASILDSGLSLIFDSTRSLAALNIMATLDALQQQGLSRALRDVNQTVLNNQTARLQSGETFFIRRVVNDQVERVPFD
VGLIVEVTPQITADGQILLNIKAEVSGNVQRNPVDGDVDRFTKQVVTTTLRVKDGETVVLGGLTSQESNQSQQGVPLLMD
IPLIGELFKQRTNESTDKELLVVITADILKETASANP

Nucleotide

• Length: 2274 bp

>NTDB_id=74175 TthHC11_RS07425 WP_143591393.1 1387669..1389942(+) (pilQ) [Thermus thermophilus strain HC11]
ATGAAGAGCACGTGGATCCGTGCGGCCGTGATCGCCCTCGCAGGGCTAGGGGCTTTTGCCCTTGCGGGGAGCTTTCCCGA
GGAGCTCCGCTTCCAGGCCCCGGTGAACCTCAAGGTCTCGGAATCCCAGGTCAAGGCGGGCCAGACCCTGCCCCTGGACG
TGGTCCTCGAGGCCCTGGCAAGGAGCGTGGGGCTTCAGCCCCTCATCTACCGGGCCTACGACCCAAGCGGGGACCCCGCC
AAGGCCCAGCCCCCCCTGCCCAACATCAAGCTGGACTTCCAGGGCAAGCCCTTCCGGGAGGTCTGGGACCTCCTCTTCGC
CACCTACGGCAACCAGTACAGCCTGGACTACCTCTTCCTGCCCCCCGACGTGGTGGTGGTGGCCCCCACCCAGGTGATCA
CCGCCCTGGTGGACGCCCCGAGCCGCACGGGGGCCATGGAGCGTAGGCCCTACATCGTGGGCATCCCCGAGATCGCCTAC
AAGCGCACGGAGACGGACGCCCAGGGCCAGCCCCGCACGGTCGTCAACATTGAGGGCGCCAAGGCCTGGGTCCAGAACGA
CCTCCTCCCCTTCCTCTCCCGGGAGGCCGCGGGGCTCAACGTGAACTGGATCGTGGTGGAGGAGGGCGGGAGGCTCAAGG
CCGTTCTCTCCGTTCTCGCCACCCCCGAGCAACACGCCCGCTTCTCCGACATTCTGCAGCGGGCCGGGATTGACTTCCGC
CCCCTCCCCGCCCTGGCCCAGCCCAAGCCCCGGGTGGAGAAGACCTACACCCTCACCTACGCCACCTTCCCCGAACTCCT
CGCCTTCCTCCAGTCCCGCCTCCCCGAGGCCCAGATCAGCGTGGTCCCCACCAACCCCCAAAGGGCCATCGTCCTCGCCA
CCGAGGAGGACCACGCCCGCTTGAGCGAGCTTCTGAAGACGGCCGACGTCCCCAAGACCGTCCGCCGGGTCTACGCCCTG
CAGAACCTCACCTTCGCTGAGGCCCAGGAGCGCCTAAAGCCCCTCCTGGAGAAGGACCTCAAGGGGGCCCGCCTGGAGAG
CCTCCCCGGCAACCCCAAGGCCCTCCTCCTCGAGGCCCCCGAGGCGGAGCACGCCCTCTTCGCCGAGATCCTGAAGGCCC
TGGACGTCCCCCCCCAGGCCCCCCAAGCCCCCCAGGAGGCCACCTTGCGGCGCCTCTACCCCCTGCGCTACGCCAACGCC
GAGCAGGTGGCCCCCTTCCTCGCCCGGGAGGTGCCGGGGATCGTGGTCCAGACCGTCCCCGGCCAGCCCGTCCTCTCGGT
GCGGGGCACGGAAGCGCAGCTTGGGGAGGTGGAAAGCCTCCTCGCCCAGATTGACCGGGCCCCCGAGCAAGGCCCTCCCG
TGTTCCAGCGGGCCTACCAGCTCTCCAACGCCAAGGCGGTGGAGCTCGCCCAGGTGCTCCAGGAGGCGCTCAAGGCCCGG
CAGGCCCAAAACCAGGGCCAGCAGAACCAGGCCCTCCCCACCCGGGAGGCCACGGTGGTGGCCGACCCCAGGACCAACAC
CCTCATCGTCACCGGCACCCAGGAGGACCTCGCCCTGGTGGAGGGCCTCATCCCCAAGCTGGACCAGCCTGTGCCCCAGG
TTTCCTTGCGGGTGCGCATCCAGGAGGTCCAGTCCAACCTGACCCGTAGCCTCGGCCTCAAGTGGAACAGCATCGCCGGC
GGCAACGTGGCGGCCAGCATCCTGGACTCGGGCCTTTCCCTCATCTTTGACTCCACGCGAAGCCTCGCCGCCCTCAACAT
CATGGCCACCCTGGACGCCCTGCAGCAACAGGGCCTCTCCCGGGCCCTCCGGGACGTGAACCAGACCGTCCTCAACAACC
AGACCGCCCGCCTGCAGTCCGGCGAGACCTTCTTCATCCGGCGGGTGGTGAACGACCAGGTGGAACGGGTCCCCTTTGAC
GTGGGGCTCATCGTGGAGGTCACGCCCCAGATCACCGCCGACGGCCAGATCCTCCTCAACATCAAGGCCGAGGTCTCGGG
GAACGTGCAGCGCAACCCCGTGGACGGGGACGTGGACCGCTTCACCAAGCAGGTGGTGACCACCACCCTCAGGGTCAAAG
ACGGGGAGACCGTGGTCCTCGGGGGTCTCACCTCCCAGGAGTCCAACCAGAGCCAGCAGGGGGTGCCCCTCCTCATGGAC
ATCCCCCTGATCGGCGAGCTCTTCAAGCAGCGGACGAACGAGAGCACCGACAAGGAGCTTTTGGTGGTGATCACCGCCGA
CATCCTCAAGGAGACGGCCTCGGCGAACCCCTAA

Domains

Predicted by InterproScan.

• Bacterial type II and III secretion system protein (Secretin) (593-750)

• Bacterial type II/III secretion system short domain (Secretin_N) (457-533)

• Bacterial type II/III secretion system short domain (Secretin_N) (391-450)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilQ	Thermus thermophilus HB27	98.018	100	0.98