Detailed information
Bioinformatically predicted
Overview
| Name | opaR | Type | Regulator |
| Locus tag | VroAM7_RS13375 | Genome accession | NZ_AP019798 |
| Coordinates | 2869542..2870156 (+) | Length | 204 a.a. |
| NCBI ID | WP_010450170.1 | Uniprot ID | A0A2K7SNB8 |
| Organism | Vibrio rotiferianus strain AM7 | ||
| Function | regulation of Dns (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2864542..2875156
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| VroAM7_RS13355 (VroAM7_25160) | - | 2864823..2865740 (-) | 918 | WP_045394204.1 | ABC transporter ATP-binding protein | - |
| VroAM7_RS13360 (VroAM7_25170) | - | 2865981..2867651 (-) | 1671 | WP_038885742.1 | SulP family inorganic anion transporter | - |
| VroAM7_RS13365 (VroAM7_25180) | can | 2867935..2868603 (+) | 669 | WP_010450166.1 | carbonate dehydratase | - |
| VroAM7_RS13370 (VroAM7_25190) | hpt | 2868692..2869222 (-) | 531 | WP_143692957.1 | hypoxanthine phosphoribosyltransferase | - |
| VroAM7_RS13375 (VroAM7_25200) | opaR | 2869542..2870156 (+) | 615 | WP_010450170.1 | LuxR/HapR/OpaR family quorum-sensing transcriptional regulator | Regulator |
| VroAM7_RS13380 (VroAM7_25210) | lpdA | 2870471..2871901 (-) | 1431 | WP_005438019.1 | dihydrolipoyl dehydrogenase | - |
| VroAM7_RS13385 (VroAM7_25220) | aceF | 2872145..2874046 (-) | 1902 | WP_143692958.1 | pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase | - |
Sequence
Protein
Download Length: 204 a.a. Molecular weight: 23561.80 Da Isoelectric Point: 6.0765
>NTDB_id=74126 VroAM7_RS13375 WP_010450170.1 2869542..2870156(+) (opaR) [Vibrio rotiferianus strain AM7]
MDSIAKRPRTRLSPLKRKQQLMEIALEVFARRGIGRGGHADIAEIAQVSVATVFNYFPTREDLVDEVLNHVVRQFSNFLS
DNIDLDIHARENIANITNAMIELVSQDCHWLKVWFEWSASTRDEVWPLFVTTNRTNQLLVQNMFIKAIERGEVCSEHEPE
HLANLFHGICYSLFVQANRSKSESELASLVNSYLDMLCIYNRDH
MDSIAKRPRTRLSPLKRKQQLMEIALEVFARRGIGRGGHADIAEIAQVSVATVFNYFPTREDLVDEVLNHVVRQFSNFLS
DNIDLDIHARENIANITNAMIELVSQDCHWLKVWFEWSASTRDEVWPLFVTTNRTNQLLVQNMFIKAIERGEVCSEHEPE
HLANLFHGICYSLFVQANRSKSESELASLVNSYLDMLCIYNRDH
Nucleotide
Download Length: 615 bp
>NTDB_id=74126 VroAM7_RS13375 WP_010450170.1 2869542..2870156(+) (opaR) [Vibrio rotiferianus strain AM7]
ATGGACTCAATTGCAAAGAGGCCTCGTACTAGGCTTTCACCTCTTAAACGTAAGCAACAACTGATGGAAATCGCTCTAGA
AGTATTTGCTCGTCGCGGCATTGGCCGTGGTGGTCATGCGGATATTGCCGAGATCGCTCAAGTTTCTGTTGCGACTGTAT
TTAACTACTTCCCGACTCGCGAAGATTTGGTTGACGAAGTTCTGAACCACGTTGTACGTCAGTTCTCTAACTTCTTGTCT
GATAACATTGACTTAGACATTCATGCTCGTGAGAACATCGCCAACATCACTAATGCAATGATTGAGCTAGTAAGCCAAGA
TTGCCACTGGCTGAAAGTATGGTTTGAGTGGAGTGCATCAACACGTGATGAAGTATGGCCACTTTTTGTTACCACAAACC
GTACTAACCAACTGCTAGTGCAAAACATGTTCATTAAGGCAATCGAACGTGGTGAAGTATGTTCTGAGCATGAACCAGAG
CACTTGGCAAACCTCTTCCATGGCATCTGTTACTCTTTATTTGTGCAAGCAAATCGTTCTAAGAGTGAATCTGAACTAGC
TAGTTTAGTTAATTCTTACTTAGATATGCTTTGCATCTACAACCGCGACCATTAA
ATGGACTCAATTGCAAAGAGGCCTCGTACTAGGCTTTCACCTCTTAAACGTAAGCAACAACTGATGGAAATCGCTCTAGA
AGTATTTGCTCGTCGCGGCATTGGCCGTGGTGGTCATGCGGATATTGCCGAGATCGCTCAAGTTTCTGTTGCGACTGTAT
TTAACTACTTCCCGACTCGCGAAGATTTGGTTGACGAAGTTCTGAACCACGTTGTACGTCAGTTCTCTAACTTCTTGTCT
GATAACATTGACTTAGACATTCATGCTCGTGAGAACATCGCCAACATCACTAATGCAATGATTGAGCTAGTAAGCCAAGA
TTGCCACTGGCTGAAAGTATGGTTTGAGTGGAGTGCATCAACACGTGATGAAGTATGGCCACTTTTTGTTACCACAAACC
GTACTAACCAACTGCTAGTGCAAAACATGTTCATTAAGGCAATCGAACGTGGTGAAGTATGTTCTGAGCATGAACCAGAG
CACTTGGCAAACCTCTTCCATGGCATCTGTTACTCTTTATTTGTGCAAGCAAATCGTTCTAAGAGTGAATCTGAACTAGC
TAGTTTAGTTAATTCTTACTTAGATATGCTTTGCATCTACAACCGCGACCATTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| opaR | Vibrio parahaemolyticus RIMD 2210633 |
93.627 |
100 |
0.936 |
| hapR | Vibrio cholerae C6706 |
71.717 |
97.059 |
0.696 |
| hapR | Vibrio cholerae strain A1552 |
71.717 |
97.059 |
0.696 |