Detailed information NTG0074111

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: VroAM7_RS01490
• Genome accession: NZ_AP019798
• Coordinates: 321574..322581 (-)
• Length: 335 a.a.
• NCBI ID: WP_045386374.1
• Uniprot ID: A0A510I363
• Organism: Vibrio rotiferianus strain AM7
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 316574..327581

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
VroAM7_RS01465 (VroAM7_02760)	rraA	316848..317372 (-)	525	WP_010445263.1	ribonuclease E activity regulator RraA	-
VroAM7_RS01470 (VroAM7_02770)	-	317448..318365 (-)	918	WP_010445265.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
VroAM7_RS01475 (VroAM7_02780)	hslU	318676..320007 (-)	1332	WP_010445268.1	HslU--HslV peptidase ATPase subunit	-
VroAM7_RS01480 (VroAM7_02790)	hslV	320037..320588 (-)	552	WP_009698878.1	ATP-dependent protease subunit HslV	-
VroAM7_RS01485 (VroAM7_02800)	ftsN	320892..321437 (-)	546	WP_088881385.1	cell division protein FtsN	-
VroAM7_RS01490 (VroAM7_02810)	cytR	321574..322581 (-)	1008	WP_045386374.1	DNA-binding transcriptional regulator CytR	Regulator
VroAM7_RS01495 (VroAM7_02820)	priA	322786..324987 (-)	2202	WP_143691829.1	primosomal protein N'	-
VroAM7_RS01505 (VroAM7_02830)	rpmE	325285..325503 (+)	219	WP_010445294.1	50S ribosomal protein L31	-
VroAM7_RS01510 (VroAM7_02840)	rpsJ	325960..326271 (+)	312	WP_004410492.1	30S ribosomal protein S10	-
VroAM7_RS01515 (VroAM7_02850)	rplC	326286..326915 (+)	630	WP_005435072.1	50S ribosomal protein L3	-
VroAM7_RS01520 (VroAM7_02860)	rplD	326933..327535 (+)	603	WP_005435074.1	50S ribosomal protein L4	-

Sequence

Protein

• Length: 335 a.a.
• Molecular weight: 36862.42 Da
• Isoelectric Point: 6.2459

>NTDB_id=74111 VroAM7_RS01490 WP_045386374.1 321574..322581(-) (cytR) [Vibrio rotiferianus strain AM7]
MATMKDVAQLAGVSTATVSRALMNPEKVSSSTRKRVEDAVLEAGYSPNSLARNLRRNESKTIVTIVPDICDPYFSEIIRG
IEDAAMEHGYLVLLGDSGQQKKRESSFVNLVFTKQADGMLLLGTDLPFDVSKPEQKNLPPMVMACEFAPELELPTVHIDN
LTSAFEAVNYLTQLGHKRIAQISGPESAALCQFRQQGYQQALRRAGITKEAQYSIVTDFTFEGGAQAIRKLLELPEPPTA
VFCHCDTMAIGAIQEAKRLGLRVPQDISIVGFDDIQFAQYCDPPLTTISQPRYEIGRQAMLMMLELLKGHDVHSGSRLLE
TKLVVRGSAAPPPLR

Nucleotide

• Length: 1008 bp

>NTDB_id=74111 VroAM7_RS01490 WP_045386374.1 321574..322581(-) (cytR) [Vibrio rotiferianus strain AM7]
ATGGCGACAATGAAGGATGTTGCCCAGCTTGCTGGAGTCTCTACCGCAACCGTGTCGCGAGCTCTGATGAATCCGGAAAA
AGTATCATCATCGACACGAAAAAGAGTAGAAGATGCAGTACTTGAAGCTGGCTACTCACCGAATTCATTAGCACGCAACT
TACGTAGAAATGAATCAAAAACCATTGTCACTATAGTTCCCGACATCTGCGATCCGTACTTTTCTGAAATCATTCGTGGT
ATCGAAGATGCAGCAATGGAACATGGCTACCTAGTCCTACTGGGCGACAGTGGTCAACAGAAAAAACGAGAAAGCTCATT
TGTAAACCTCGTCTTTACCAAACAAGCTGATGGCATGCTACTGCTAGGCACCGATTTACCATTCGATGTCAGCAAGCCAG
AACAGAAAAACTTACCGCCTATGGTGATGGCTTGTGAGTTTGCTCCTGAGCTAGAACTGCCAACCGTACACATTGATAAC
CTAACCTCAGCTTTTGAAGCTGTGAACTACCTAACTCAATTAGGCCATAAGCGTATCGCTCAAATCTCTGGTCCAGAGAG
TGCTGCACTATGCCAATTCCGTCAGCAGGGTTACCAACAGGCGTTACGTCGTGCGGGCATTACTAAAGAAGCACAATACA
GTATCGTTACTGACTTCACCTTTGAAGGCGGTGCACAAGCAATCCGTAAACTACTCGAACTACCAGAGCCACCTACCGCT
GTATTCTGTCATTGTGACACCATGGCTATTGGTGCGATCCAAGAAGCAAAACGCCTAGGATTGAGAGTTCCACAAGACAT
CTCAATTGTTGGGTTTGACGATATCCAATTTGCTCAGTACTGCGATCCACCGTTAACTACCATCTCGCAACCTCGTTATG
AGATCGGTCGCCAGGCCATGCTAATGATGCTAGAGCTGTTAAAAGGTCATGATGTACACTCCGGCTCTCGCTTACTTGAG
ACCAAACTTGTTGTTCGAGGTAGTGCTGCTCCACCACCATTACGCTGA

Domains

Predicted by InterproScan.

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-328)

3D structure

• AlphaFold DB: A0A510I363

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	94.88	99.104	0.94
cytR	Vibrio cholerae C6706	91.265	99.104	0.904