Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | OIO72_RS09110 | Genome accession | NZ_CP107585 |
| Coordinates | 1866595..1866975 (+) | Length | 126 a.a. |
| NCBI ID | WP_000836911.1 | Uniprot ID | - |
| Organism | Acinetobacter baumannii strain 1326527-1 | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1861595..1871975
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OIO72_RS09080 (OIO72_09085) | kdsB | 1862498..1863259 (+) | 762 | WP_000680701.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
| OIO72_RS09085 (OIO72_09090) | - | 1863271..1864251 (+) | 981 | WP_001075416.1 | DNA polymerase III subunit delta' | - |
| OIO72_RS09090 (OIO72_09095) | - | 1864263..1864604 (+) | 342 | WP_001183024.1 | PilZ domain-containing protein | - |
| OIO72_RS09095 (OIO72_09100) | - | 1864622..1865395 (+) | 774 | WP_000497298.1 | TatD family hydrolase | - |
| OIO72_RS09100 (OIO72_09105) | - | 1865433..1866041 (+) | 609 | WP_000375838.1 | TetR/AcrR family transcriptional regulator | - |
| OIO72_RS09105 (OIO72_09110) | - | 1866051..1866605 (+) | 555 | WP_000841367.1 | type II secretion system protein | - |
| OIO72_RS09110 (OIO72_09115) | xcpV | 1866595..1866975 (+) | 381 | WP_000836911.1 | type II secretion system minor pseudopilin GspI | Machinery gene |
| OIO72_RS09115 (OIO72_09120) | xcpW | 1866975..1867676 (+) | 702 | WP_000594580.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| OIO72_RS09120 (OIO72_09125) | gspK | 1867676..1868635 (+) | 960 | WP_031960447.1 | type II secretion system minor pseudopilin GspK | - |
| OIO72_RS09125 (OIO72_09130) | - | 1868865..1869461 (+) | 597 | WP_000908453.1 | 6-carboxytetrahydropterin synthase | - |
| OIO72_RS09130 (OIO72_09135) | ung | 1869512..1870225 (+) | 714 | WP_001177528.1 | uracil-DNA glycosylase | - |
| OIO72_RS09135 (OIO72_09140) | - | 1870222..1871346 (+) | 1125 | WP_109067466.1 | enoyl-CoA hydratase/isomerase family protein | - |
| OIO72_RS09140 (OIO72_09145) | tadA | 1871353..1871856 (+) | 504 | WP_031960449.1 | tRNA adenosine(34) deaminase TadA | - |
Sequence
Protein
Download Length: 126 a.a. Molecular weight: 13975.20 Da Isoelectric Point: 9.8004
>NTDB_id=740967 OIO72_RS09110 WP_000836911.1 1866595..1866975(+) (xcpV) [Acinetobacter baumannii strain 1326527-1]
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
Nucleotide
Download Length: 381 bp
>NTDB_id=740967 OIO72_RS09110 WP_000836911.1 1866595..1866975(+) (xcpV) [Acinetobacter baumannii strain 1326527-1]
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCTGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACTAAAGCTCAGTTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACTCAAAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACTCATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCTGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACTAAAGCTCAGTTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACTCAAAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACTCATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
100 |
100 |
1 |