Detailed information    

insolico Bioinformatically predicted

Overview

Name   pepF   Type   Regulator
Locus tag   OFW50_RS01150 Genome accession   NZ_CP107523
Coordinates   241493..243292 (-) Length   599 a.a.
NCBI ID   WP_129301967.1    Uniprot ID   A0A4Q1TUU4
Organism   Lacticaseibacillus chiayiensis strain AACE 3     
Function   degradation of XIP; competence shut-off (predicted from homology)   
Competence regulation

Genomic Context

Location: 236493..248292
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OFW50_RS01120 (OFW50_01120) - 236603..237634 (+) 1032 WP_129301979.1 capsular biosynthesis protein CpsH -
  OFW50_RS01125 (OFW50_01125) - 237758..238102 (+) 345 WP_129301963.1 hypothetical protein -
  OFW50_RS01130 (OFW50_01130) - 238176..238895 (+) 720 WP_039639686.1 metal ABC transporter ATP-binding protein -
  OFW50_RS01135 (OFW50_01135) - 238892..239689 (+) 798 WP_129301964.1 metal ABC transporter permease -
  OFW50_RS01140 (OFW50_01140) - 239770..240618 (-) 849 WP_129301965.1 metallophosphoesterase family protein -
  OFW50_RS01145 (OFW50_01145) - 240615..241496 (-) 882 WP_129301966.1 NAD(P)-dependent oxidoreductase -
  OFW50_RS01150 (OFW50_01150) pepF 241493..243292 (-) 1800 WP_129301967.1 oligoendopeptidase F Regulator
  OFW50_RS01155 (OFW50_01155) - 243421..244515 (+) 1095 WP_129301968.1 LCP family protein -
  OFW50_RS01160 (OFW50_01160) brnQ 244678..246057 (-) 1380 WP_129301969.1 branched-chain amino acid transport system II carrier protein -
  OFW50_RS01165 (OFW50_01165) - 246931..247614 (-) 684 WP_129301970.1 hydrolase -

Sequence

Protein


Download         Length: 599 a.a.        Molecular weight: 67305.47 Da        Isoelectric Point: 5.4341

>NTDB_id=740426 OFW50_RS01150 WP_129301967.1 241493..243292(-) (pepF) [Lacticaseibacillus chiayiensis strain AACE 3]
MQHLPVREDVPTKLTWDLTTIYPNDAAWVADFEAVREQAKEAAMLKGTLGNSADALINGIKAVLSVFRRFEKVYVYSSLK
SDQDTGNATYQAMNAKAESLGAELASQLAFLDPEILAIPADKLTAWRDTESLKPFGHFIDAITVNRQHVLTTAAEALIAS
AGDALNASHATFNVLDNSDLQFGFVENEDGETVQLSNGLYGQLIRSTQRKLRKEAFETLLRAYESMKNTFAQTLSGQVKA
HNFNAKVHHYATARAAAMASNHIPESVYTTLIDQVNTHLPLLHRYVALRKKILGVDQLHMYDIYTPLTGKPPLTFTLDQA
KVEALKALAPLGDDYLSHVREIFDNRYIDVVENKGKRSGAYSGGSYDTNPFILLNWHDAVDELYTLIHETGHSVHSWYTR
HNQPYVYGDYPIFVAEIASTTNENLLTDYFLAHTDDPKVRAYILNYYLDGFKGTVFRQAQFAEFEHWIHQQDQQGEPLTA
TSMATYYADLNARYYGPDVARDPEIAFEWARIPHFYYNYYVYQYATGFAAASTLAAGISSGEPNAASRYLDYLKSGSSQY
AIDTMKTAGVDMTKPDYLEAAFSMFEKRLTELEELLQKG

Nucleotide


Download         Length: 1800 bp        

>NTDB_id=740426 OFW50_RS01150 WP_129301967.1 241493..243292(-) (pepF) [Lacticaseibacillus chiayiensis strain AACE 3]
ATGCAACATTTACCGGTACGTGAAGATGTTCCAACCAAGCTGACGTGGGATCTAACCACCATTTATCCAAATGATGCAGC
CTGGGTAGCCGACTTTGAAGCTGTGCGTGAACAGGCCAAAGAGGCGGCCATGCTCAAGGGAACGTTAGGCAATTCAGCAG
ATGCGCTCATCAACGGTATTAAGGCGGTTTTATCAGTCTTCCGGCGATTTGAAAAAGTCTATGTTTATTCAAGCCTGAAA
AGCGATCAAGATACTGGCAATGCCACTTATCAGGCAATGAATGCCAAGGCCGAAAGCCTCGGCGCCGAGCTTGCTAGTCA
GTTAGCCTTTTTGGATCCAGAAATTTTGGCAATTCCGGCCGACAAGCTGACAGCATGGCGCGACACCGAAAGCCTCAAGC
CGTTTGGGCATTTTATTGATGCGATCACCGTCAATCGCCAACATGTGCTGACAACCGCAGCAGAGGCTCTGATTGCTAGT
GCCGGCGATGCGCTGAACGCCAGTCATGCCACTTTTAACGTCCTAGACAACTCCGACCTGCAATTCGGTTTTGTCGAAAA
TGAAGACGGCGAAACGGTACAACTCAGTAATGGCTTGTATGGCCAGTTGATTCGCTCAACCCAGCGAAAATTACGCAAAG
AAGCATTTGAAACGTTACTGCGCGCTTACGAAAGCATGAAGAACACGTTTGCCCAAACACTGAGCGGTCAGGTCAAGGCG
CACAACTTCAATGCCAAAGTCCATCATTACGCCACGGCCCGCGCGGCGGCAATGGCAAGCAACCACATTCCGGAAAGTGT
TTATACGACCCTCATTGACCAGGTCAACACCCATCTGCCGCTTCTGCATCGCTATGTTGCATTGCGGAAAAAAATCCTGG
GCGTCGATCAACTGCACATGTACGACATTTACACCCCGTTGACAGGTAAGCCACCATTGACGTTCACGCTCGACCAGGCT
AAAGTCGAAGCATTAAAGGCTTTGGCGCCGCTTGGTGATGATTATCTCAGCCATGTCCGGGAAATCTTTGACAACCGCTA
CATTGATGTTGTTGAAAACAAGGGCAAACGCTCAGGTGCTTATTCGGGTGGGTCTTACGATACGAATCCGTTTATTTTGC
TGAACTGGCATGACGCGGTGGACGAACTTTATACCTTGATACACGAAACCGGCCACAGCGTCCACAGCTGGTACACCCGC
CACAATCAGCCTTATGTATACGGTGATTACCCGATTTTTGTTGCCGAGATTGCATCGACTACCAACGAAAATCTGCTTAC
CGATTACTTCCTGGCCCACACAGATGATCCCAAGGTACGCGCCTACATCCTGAACTACTATCTCGATGGTTTTAAAGGCA
CCGTGTTCCGCCAAGCACAATTTGCCGAATTTGAGCACTGGATTCATCAGCAGGATCAACAAGGCGAACCGCTCACAGCA
ACTAGTATGGCAACATACTACGCCGATCTCAATGCCCGGTATTATGGACCGGATGTTGCTCGCGATCCCGAAATTGCCTT
CGAATGGGCACGAATCCCGCATTTCTATTACAATTATTATGTCTATCAGTATGCAACCGGATTTGCTGCAGCATCGACGC
TCGCAGCTGGTATTAGCAGTGGCGAGCCTAACGCCGCATCCCGCTACTTGGATTATTTAAAGTCAGGTAGTTCGCAATAT
GCCATTGATACCATGAAAACCGCTGGCGTTGATATGACCAAACCGGACTATCTGGAAGCCGCATTTTCGATGTTTGAGAA
GCGTTTAACGGAATTGGAAGAACTTTTGCAGAAAGGATGA

Domains

Predicted by InterproScan.

Peptidase family M3 (Peptidase_M3)

(203-582)

Oligopeptidase F (Peptidase_M3_N)

(114-182)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A4Q1TUU4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pepF Streptococcus salivarius strain HSISS4

52.525

99.165

0.521