Detailed information    

insolico Bioinformatically predicted

Overview

Name   irvR   Type   Regulator
Locus tag   QAY83_RS11690 Genome accession   NZ_CP122484
Coordinates   2314079..2314792 (+) Length   237 a.a.
NCBI ID   WP_001031454.1    Uniprot ID   A0A0H2XG68
Organism   Staphylococcus aureus strain SW-MSSA63     
Function   regulate expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2309079..2319792
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QAY83_RS11635 (QAY83_11620) - 2309829..2310386 (-) 558 WP_031838285.1 DUF2815 family protein -
  QAY83_RS11640 (QAY83_11625) - 2310413..2311579 (-) 1167 WP_411905961.1 DUF2800 domain-containing protein -
  QAY83_RS11645 (QAY83_11630) - 2311576..2311938 (-) 363 WP_000985986.1 hypothetical protein -
  QAY83_RS11650 (QAY83_11635) - 2311953..2312276 (-) 324 WP_341262151.1 TrmB family transcriptional regulator -
  QAY83_RS11655 (QAY83_11640) - 2312355..2312516 (-) 162 WP_001285954.1 DUF1270 domain-containing protein -
  QAY83_RS11660 (QAY83_11645) - 2312529..2312792 (-) 264 WP_001124160.1 helix-turn-helix domain-containing protein -
  QAY83_RS11665 (QAY83_11650) - 2312817..2313032 (-) 216 WP_001097552.1 hypothetical protein -
  QAY83_RS11670 (QAY83_11655) - 2313087..2313452 (+) 366 WP_001128433.1 hypothetical protein -
  QAY83_RS11675 (QAY83_11660) - 2313421..2313666 (-) 246 WP_001025401.1 DUF2829 domain-containing protein -
  QAY83_RS11680 (QAY83_11665) - 2313682..2313945 (-) 264 WP_000854072.1 helix-turn-helix transcriptional regulator -
  QAY83_RS11685 (QAY83_11670) - 2313942..2314116 (-) 175 Protein_2256 transcriptional regulator -
  QAY83_RS11690 (QAY83_11675) irvR 2314079..2314792 (+) 714 WP_001031454.1 XRE family transcriptional regulator Regulator
  QAY83_RS11695 (QAY83_11680) - 2314808..2315740 (+) 933 WP_000759682.1 exonuclease domain-containing protein -
  QAY83_RS11700 (QAY83_11685) - 2315746..2316087 (+) 342 WP_000591749.1 hypothetical protein -
  QAY83_RS11705 (QAY83_11690) - 2316291..2316473 (+) 183 WP_000705240.1 hypothetical protein -
  QAY83_RS11710 (QAY83_11695) - 2316510..2316656 (+) 147 WP_001013104.1 hypothetical protein -
  QAY83_RS11715 (QAY83_11700) - 2316653..2317267 (-) 615 WP_029052131.1 ATPase -
  QAY83_RS11720 (QAY83_11705) - 2317380..2318585 (+) 1206 WP_000264187.1 tyrosine-type recombinase/integrase -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27017.58 Da        Isoelectric Point: 5.0545

>NTDB_id=739912 QAY83_RS11690 WP_001031454.1 2314079..2314792(+) (irvR) [Staphylococcus aureus strain SW-MSSA63]
MNKERNIIIAKNIRKFLNDSNMSQKKLAELINIKPSTLSDYLNLRSNPSHGVIQRIADVFEVGKSDIDTTYKDDNDITSI
YNKLTPPRQENVLNYANEQLEEQNSKGDNVVDINSYKQEKTPVNVNGCVSAGVGERLHDETLFTEMVKGPIPTHDLALKV
NGDSMEPMFKDGEIIFVEKTHNIKNGQIGIFIIEEEAYVKKVFVEDDRLTLVSLNKDYDDLHFYRNESVRLIGKVIL

Nucleotide


Download         Length: 714 bp        

>NTDB_id=739912 QAY83_RS11690 WP_001031454.1 2314079..2314792(+) (irvR) [Staphylococcus aureus strain SW-MSSA63]
ATGAACAAAGAAAGAAATATTATTATAGCCAAAAACATTAGAAAATTTCTCAACGATTCAAATATGTCTCAAAAGAAACT
TGCTGAACTCATTAACATAAAACCATCTACTTTAAGCGATTATTTAAATTTACGTTCCAACCCCTCTCACGGCGTTATAC
AAAGGATAGCTGATGTTTTCGAGGTTGGTAAAAGCGACATAGATACTACATACAAAGACGATAACGACATCACTTCCATA
TACAACAAACTCACACCTCCCCGCCAAGAAAACGTACTTAACTATGCAAATGAACAATTGGAAGAACAGAATTCTAAAGG
AGATAACGTTGTAGATATTAATTCATATAAACAGGAGAAAACTCCAGTTAACGTCAATGGTTGCGTCTCTGCTGGTGTAG
GAGAACGTTTACACGATGAAACGCTATTTACTGAAATGGTTAAAGGACCTATCCCCACACACGATTTAGCGTTAAAAGTA
AATGGTGATTCTATGGAACCTATGTTTAAAGATGGCGAAATCATATTTGTGGAGAAAACTCACAATATAAAGAATGGACA
AATTGGTATATTCATCATTGAAGAAGAAGCGTACGTTAAGAAAGTCTTTGTTGAAGATGATAGATTGACTCTAGTTTCAC
TAAATAAAGATTACGACGATCTACACTTTTATAGAAATGAAAGTGTGAGGTTAATTGGAAAAGTTATTTTATAA

Domains

Predicted by InterProScan.

Peptidase S24-like (Peptidase_S24)

(127-236)

Helix-turn-helix (HTH_3)

(13-63)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H2XG68

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  irvR Streptococcus mutans UA159

33.929

100

0.401