Detailed information    

insolico Bioinformatically predicted

Overview

Name   disA   Type   Machinery gene
Locus tag   QBL25_RS23420 Genome accession   NZ_CP122310
Coordinates   5334340..5335464 (-) Length   374 a.a.
NCBI ID   WP_409058972.1    Uniprot ID   -
Organism   Streptomyces sp. SYP-A7185     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 5329340..5340464
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QBL25_RS23400 - 5330313..5331923 (+) 1611 WP_409058968.1 sensor histidine kinase -
  QBL25_RS23405 - 5331920..5332573 (+) 654 WP_409058969.1 response regulator -
  QBL25_RS23410 - 5332640..5333302 (-) 663 WP_409058970.1 phosphatase PAP2 family protein -
  QBL25_RS23415 - 5333487..5334305 (+) 819 WP_409058971.1 hypothetical protein -
  QBL25_RS23420 disA 5334340..5335464 (-) 1125 WP_409058972.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  QBL25_RS23425 radA/sms 5335544..5336953 (-) 1410 WP_409058973.1 DNA repair protein RadA Machinery gene
  QBL25_RS23430 - 5337197..5338912 (+) 1716 WP_409058974.1 BACON domain-containing protein -
  QBL25_RS23435 - 5338909..5339751 (-) 843 WP_409058975.1 hypothetical protein -

Sequence

Protein


Download         Length: 374 a.a.        Molecular weight: 40253.10 Da        Isoelectric Point: 4.9304

>NTDB_id=738889 QBL25_RS23420 WP_409058972.1 5334340..5335464(-) (disA) [Streptomyces sp. SYP-A7185]
MAANDRASAPGKSGGSAGADGLMRASLSAVAPGTGLRDGLERILRGNTGGLIVLGWDKTVESMCTGGFILDVEFTATRLR
ELCKLDGGIVVDKDLTKILRAGVQLVPDPTIPTEETGTRHRTADRVSKQVAFPVVSVSQSMRLIAIYVDGQRRVLEDSAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVTAVAQRLEMVRRIATEIAEYVVELGTDGRLLALQLDELIA
GVEPERELVVRDYVPEPTAKRSRTVEEALFELDALSHAELLELPTVARALGYTGSPEALDSAVSPRGFRLLAKVPRLPGA
IIDRLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=738889 QBL25_RS23420 WP_409058972.1 5334340..5335464(-) (disA) [Streptomyces sp. SYP-A7185]
GTGGCAGCCAACGACCGGGCGTCAGCTCCCGGCAAGTCCGGTGGGAGTGCCGGTGCCGACGGGCTGATGCGCGCCTCCCT
GAGCGCGGTCGCGCCCGGCACGGGCCTGCGCGACGGACTGGAGCGCATCCTCCGCGGCAACACCGGAGGACTCATCGTCC
TCGGCTGGGACAAGACCGTCGAGTCGATGTGTACGGGCGGCTTCATCCTGGACGTCGAGTTCACGGCGACGCGCCTGCGC
GAGCTGTGCAAGCTCGACGGCGGCATCGTCGTCGACAAGGACCTGACCAAGATCCTGCGGGCGGGCGTGCAGCTCGTCCC
CGACCCGACGATCCCCACGGAGGAGACGGGCACCCGGCACCGCACCGCGGACCGCGTGTCCAAGCAGGTCGCCTTCCCGG
TCGTCTCCGTCTCCCAGTCCATGCGCCTCATCGCGATCTACGTGGACGGCCAGCGCCGCGTCCTGGAGGACTCGGCGGCG
ATCCTGTCCCGCGCGAACCAGGCCCTGGCGACCCTGGAGCGGTACAAACTCCGCCTCGACGAGGTGGCGGGCACCCTGTC
CGCGCTGGAGATCGAGGACTTGGTGACGGTCCGGGACGTCACGGCCGTCGCCCAGCGCCTGGAGATGGTCCGCCGGATCG
CCACCGAGATCGCCGAGTACGTGGTGGAGCTCGGCACGGACGGCCGGCTCCTCGCCCTCCAGCTGGACGAGTTGATCGCG
GGCGTCGAGCCCGAGCGCGAGCTGGTCGTCCGGGACTACGTGCCCGAACCCACCGCGAAGCGCTCCCGCACGGTCGAGGA
GGCGCTCTTCGAGCTGGACGCGCTGAGCCACGCGGAGCTGCTCGAACTGCCCACCGTCGCGCGGGCGCTGGGGTACACCG
GCTCCCCCGAGGCGCTGGACTCCGCGGTCTCCCCGCGGGGCTTCCGCCTCCTCGCCAAGGTGCCGCGCCTCCCCGGCGCC
ATCATCGACCGCCTGGTCGAGCACTTCGGCGGGCTCCAGAAGCTGCTCGCCGCGAGCGTCGACGACCTCCAGACCGTGGA
CGGCGTGGGCGAAGCGCGGGCCCGGAGCGTCCGGGAGGGGCTTTCCCGGCTGGCGGAGTCCTCGATCCTGGAGCGGTACG
TCTAG

Domains

Predicted by InterProScan.

Helix-hairpin-helix motif (HHH_2)

(324-359)

DisA bacterial checkpoint controller linker region (DisA-linker)

(155-297)

DisA bacterial checkpoint controller nucleotide-binding (DAC)

(38-151)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

44.598

96.524

0.43