Detailed information    

insolico Bioinformatically predicted

Overview


Name   braR   Type   Regulator
Locus tag   QBE57_RS03975 Genome accession   NZ_CP121670
Coordinates   799014..799679 (+) Length   221 a.a.
NCBI ID   WP_012775103.1    Uniprot ID   A0A0H3MVW7
Organism   Streptococcus suis strain HBXY-SL     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 794014..804679
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QBE57_RS03945 - 794050..794796 (+) 747 WP_011922411.1 ABC transporter permease -
  QBE57_RS03950 - 794798..795532 (+) 735 WP_171935684.1 ABC transporter permease -
  QBE57_RS03955 - 795668..796420 (+) 753 WP_011922409.1 ABC transporter ATP-binding protein -
  QBE57_RS03960 - 796421..798391 (+) 1971 WP_012775105.1 ABC transporter permease -
  QBE57_RS03965 relB 798483..798734 (+) 252 WP_012775104.1 type II toxin-antitoxin system RelB family antitoxin -
  QBE57_RS03970 - 798718..798975 (+) 258 WP_011922404.1 type II toxin-antitoxin system RelE family toxin -
  QBE57_RS03975 braR 799014..799679 (+) 666 WP_012775103.1 response regulator transcription factor Regulator
  QBE57_RS03980 - 799676..800617 (+) 942 WP_012775102.1 sensor histidine kinase -
  QBE57_RS03985 - 800693..802201 (+) 1509 WP_011922400.1 phosphomannomutase/phosphoglucomutase -
  QBE57_RS03990 xerS 802271..803341 (-) 1071 WP_012775101.1 tyrosine recombinase XerS Machinery gene

Sequence


Protein


Download         Length: 221 a.a.        Molecular weight: 25460.22 Da        Isoelectric Point: 4.7792

>NTDB_id=738562 QBE57_RS03975 WP_012775103.1 799014..799679(+) (braR) [Streptococcus suis strain HBXY-SL]
MKKEKIYIVEDDEMIVQLLKQHLGKSYQVESVQNFRAVSQEVAEIKPDLVLMDINLPYYNGFYWTTEIRKTMTMPIIFIS
SSDDEMNAVMAMNMGGDDFVSKPFSLGILDAKIGAFLRRVNQFSKSSELSIDQFQLSLDGRFSNESEQVQLSPTETKILS
ALLERQGQIVSKDELLEKLWENEEFIDQNTLNVNMTRLRKKVSEVGFERIHTVRGVGYLIK

Nucleotide


Download         Length: 666 bp        

>NTDB_id=738562 QBE57_RS03975 WP_012775103.1 799014..799679(+) (braR) [Streptococcus suis strain HBXY-SL]
ATGAAAAAAGAGAAGATTTATATTGTTGAAGATGATGAGATGATTGTCCAACTCTTGAAGCAGCATTTGGGAAAATCTTA
TCAGGTAGAAAGTGTGCAGAATTTCCGAGCTGTCAGTCAGGAAGTTGCGGAAATCAAACCAGACTTAGTGCTGATGGACA
TTAACTTGCCCTATTACAACGGTTTTTATTGGACGACAGAAATCCGTAAAACCATGACCATGCCCATTATCTTTATCTCT
TCTAGCGATGATGAGATGAATGCGGTCATGGCCATGAACATGGGTGGCGATGATTTTGTCTCCAAGCCATTTTCTCTAGG
AATTTTGGATGCCAAAATCGGAGCCTTCCTGCGTCGGGTTAATCAATTCAGCAAATCGAGCGAATTGTCTATCGATCAGT
TCCAGCTTAGTTTGGACGGGCGATTTTCAAACGAATCGGAACAGGTTCAGCTTTCACCTACTGAAACCAAGATTTTATCC
GCCTTACTAGAAAGACAAGGGCAGATTGTCAGCAAGGATGAACTCTTGGAAAAACTCTGGGAAAATGAAGAATTTATCGA
CCAGAATACGCTCAATGTAAACATGACCAGACTGCGTAAGAAGGTGAGCGAAGTCGGGTTTGAACGAATTCATACCGTTC
GTGGCGTGGGGTACTTGATCAAATGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0H3MVW7

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

47.248

98.643

0.466