Detailed information NTG0737957

Bioinformatically predicted

Overview

• Name: comEC
• Type: Machinery gene
• Locus tag: OD347_RS12560
• Genome accession: NZ_CP107079
• Coordinates: 2498055..2500406 (-)
• Length: 783 a.a.
• NCBI ID: WP_088613147.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain LT-2
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2493055..2505406

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OD347_RS12525	-	2493417..2493755 (-)	339	WP_045510470.1	YqxA family protein	-
OD347_RS12530	spoIIP	2493772..2494965 (-)	1194	WP_088613145.1	stage II sporulation protein P	-
OD347_RS12535	gpr	2495033..2496139 (-)	1107	WP_088613146.1	GPR endopeptidase	-
OD347_RS12540	rpsT	2496342..2496608 (+)	267	WP_003152876.1	30S ribosomal protein S20	-
OD347_RS12545	holA	2496626..2497667 (-)	1042	Protein_2429	DNA polymerase III subunit delta	-
OD347_RS12550	-	2497707..2497861 (-)	155	Protein_2430	hypothetical protein	-
OD347_RS12555	-	2497902..2498036 (+)	135	WP_003152870.1	YqzM family protein	-
OD347_RS12560	comEC	2498055..2500406 (-)	2352	WP_088613147.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
OD347_RS12565	-	2500407..2500976 (-)	570	WP_088613148.1	ComE operon protein 2	-
OD347_RS12570	comEA	2501042..2501656 (-)	615	WP_088613149.1	helix-hairpin-helix domain-containing protein	Machinery gene
OD347_RS12575	comER	2501716..2502537 (+)	822	WP_088613150.1	late competence protein ComER	-
OD347_RS12580	-	2502606..2503343 (-)	738	WP_088613151.1	class I SAM-dependent methyltransferase	-
OD347_RS12585	rsfS	2503340..2503696 (-)	357	WP_045510454.1	ribosome silencing factor	-
OD347_RS12590	yqeK	2503713..2504273 (-)	561	WP_088613152.1	bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK	-
OD347_RS12595	-	2504263..2504832 (-)	570	WP_045510448.1	nicotinate-nucleotide adenylyltransferase	-
OD347_RS12600	yhbY	2504843..2505133 (-)	291	WP_014470707.1	ribosome assembly RNA-binding protein YhbY	-

Sequence

Protein

• Length: 783 a.a.
• Molecular weight: 87053.93 Da
• Isoelectric Point: 9.3251

>NTDB_id=737957 OD347_RS12560 WP_088613147.1 2498055..2500406(-) (comEC) [Bacillus velezensis strain LT-2]
MKYKYLLLPLAAVSATAGTAAANSFWILFFFLLYLLFIIVKTKQHTPVIVCFVSFCLYFFLYTACDAANVSRYQAGSYTE
QALIINIPKVDGAKMSAVIRTHDKEKWVTSYKIRSLEEKRLIEQLEPGMRCTFTGSLEQPRHATIPGGFDYKEFLYSQHI
HWIFSVTSIKQCEKSEQPLFKLLNIRKNLISIIRNHVPESSAGIVEALTVGERFSIEDDILSAYQNLGVVHLMAISGMHV
GLITAGLFYALIRIGLTREKAGMLLLLFLPVYTLLSGAAPSVLRASLMLGFYIAGTLLKRSIHSSAALSMSYLLLLLFDP
YLLWQAGFQLSFAVSAALILSSSILKKAGKNRLAGLAMASFIAELSSLPFLIYHFQQISLVSFPMNMVMVPFYTLFVIPF
SVIGFLLLLLSRQAGEFLFYLFDLVMKPVHDFITYAASVDLFAMIVSKPDFLSLLMLAVSVFTLFAALEKGGFLKLRKSA
LFFFAVLAYIMFRPFFSPWGEADMLDIGQGDSLFISAPHRKGTVMVDTGGVIAYSEESWKEKHHPYSIGEKVLVPFLNGK
GVKKLDALILTHADQDHIGEAGVLIKKHRVKRLIVPVGFVKEPKDGEILNMAKENNIPVAEAKRGDTITAGDLQFQVLSP
ESPGGRSKNDSSLVLWTVLGGVSWLLTGDLESDGETEVLKTYPNLKADILKAGHHGSKSSTSEAFLKQLRPKTALISAGK
DNRYHHPHEEVLDRLKAYSVNVLRTDVSGTIQYRFTKGAGTFSVFPPYDIEETRAQEVKKTAD

Nucleotide

• Length: 2352 bp

>NTDB_id=737957 OD347_RS12560 WP_088613147.1 2498055..2500406(-) (comEC) [Bacillus velezensis strain LT-2]
ATGAAATATAAATACCTTCTTCTGCCTCTGGCGGCGGTTTCTGCAACCGCGGGAACTGCCGCCGCTAATTCCTTCTGGAT
CCTATTCTTTTTCCTTCTGTATCTTCTCTTTATTATCGTAAAAACAAAACAGCACACACCGGTTATCGTCTGCTTCGTTT
CTTTTTGTCTTTATTTCTTTCTTTATACGGCTTGTGACGCTGCGAATGTATCCCGGTATCAGGCCGGCAGCTATACTGAA
CAGGCTCTCATCATAAACATTCCGAAGGTTGACGGAGCGAAAATGTCAGCCGTTATCCGTACCCATGACAAAGAAAAATG
GGTCACTTCGTACAAAATCCGGTCCCTTGAAGAAAAAAGACTCATTGAACAGCTGGAACCGGGGATGCGCTGTACGTTTA
CAGGCTCACTGGAACAGCCCCGACATGCGACGATTCCCGGGGGTTTTGATTATAAGGAATTTCTTTACTCCCAGCATATT
CACTGGATATTTTCCGTTACTTCCATTAAGCAGTGCGAAAAATCCGAACAGCCGCTGTTTAAGCTTCTGAACATCAGAAA
GAATTTGATTTCGATCATTCGGAATCATGTACCTGAATCTTCCGCCGGAATTGTTGAGGCGCTGACCGTAGGTGAAAGAT
TTTCTATAGAGGACGATATACTGAGCGCTTATCAAAATTTGGGAGTCGTTCATTTAATGGCGATTTCCGGAATGCATGTC
GGCCTTATTACGGCGGGGTTATTTTATGCCCTTATCAGAATTGGACTGACAAGAGAAAAGGCGGGGATGTTGCTGCTGCT
TTTTTTGCCGGTGTATACGTTGTTAAGCGGTGCCGCCCCTTCTGTGCTGCGCGCATCCCTCATGCTGGGATTTTATATCG
CCGGAACTCTTTTGAAACGCAGCATTCATTCCTCAGCTGCATTGTCCATGTCTTATCTGCTGCTTCTGCTGTTTGATCCT
TACCTCCTTTGGCAGGCGGGCTTCCAGCTTTCCTTTGCGGTAAGCGCCGCTTTAATTCTGTCATCCTCCATTTTAAAGAA
AGCAGGGAAAAACAGACTCGCGGGGCTTGCGATGGCTTCATTCATTGCGGAGCTCAGTTCGCTTCCGTTTCTTATCTATC
ATTTTCAGCAGATTTCGCTCGTCAGTTTTCCGATGAATATGGTGATGGTGCCTTTTTATACGTTATTTGTCATTCCGTTT
TCTGTCATCGGTTTCCTTCTTCTCTTACTTTCCAGGCAGGCGGGGGAATTTTTGTTTTACCTGTTTGACCTTGTGATGAA
GCCTGTGCATGATTTCATTACATATGCGGCATCCGTTGATTTATTTGCAATGATTGTGTCAAAGCCTGACTTTCTGTCGC
TTCTTATGCTTGCGGTTTCCGTTTTTACGCTTTTTGCAGCTTTGGAAAAGGGAGGTTTTTTAAAGCTCAGGAAATCGGCT
CTTTTTTTCTTTGCGGTTTTGGCTTATATAATGTTCCGTCCTTTTTTCAGTCCTTGGGGAGAAGCGGATATGCTTGATAT
CGGGCAGGGAGACTCACTGTTTATAAGTGCCCCGCACCGTAAAGGTACCGTAATGGTTGATACAGGAGGAGTGATTGCTT
ATTCCGAAGAATCGTGGAAAGAAAAACACCACCCGTATTCTATCGGTGAGAAAGTTTTAGTTCCGTTTTTGAACGGAAAA
GGGGTGAAAAAGCTGGATGCGCTGATTTTAACCCATGCGGATCAGGATCATATCGGGGAAGCCGGAGTATTAATCAAAAA
ACATAGAGTGAAACGGTTAATTGTCCCTGTGGGATTCGTGAAGGAACCGAAGGATGGGGAAATATTGAATATGGCGAAAG
AAAACAACATTCCCGTTGCTGAAGCAAAACGGGGCGATACCATAACAGCCGGTGATCTTCAGTTTCAGGTGCTGTCTCCG
GAGTCGCCTGGCGGAAGGAGTAAAAATGATTCGTCACTGGTGCTTTGGACGGTTTTAGGCGGAGTGAGCTGGCTTTTGAC
GGGAGATTTAGAATCGGACGGCGAAACAGAGGTGCTGAAAACGTATCCGAATCTGAAGGCTGATATATTGAAGGCCGGTC
ATCACGGCAGCAAAAGCTCTACGAGTGAAGCCTTTTTGAAACAGCTTCGGCCGAAGACAGCGCTGATTTCAGCAGGAAAA
GATAATCGTTATCATCATCCGCATGAAGAAGTGCTGGATCGTTTGAAAGCTTACTCTGTCAATGTGCTTCGCACCGATGT
CAGCGGAACGATTCAATACAGATTTACAAAAGGCGCCGGAACGTTTTCTGTCTTCCCTCCATATGATATAGAAGAAACCA
GGGCGCAGGAAGTAAAAAAGACTGCCGATTGA

Domains

Predicted by InterproScan.

• Metallo-beta-lactamase superfamily (Lactamase_B) (508-719)

• Competence protein (Competence) (208-469)

• Domain of unknown function (DUF4131) (DUF4131) (27-171)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEC	Bacillus subtilis subsp. subtilis str. 168	55.44	98.595	0.547