Detailed information NTG0737940

Bioinformatically predicted

Overview

• Name: pilU
• Type: Machinery gene
• Locus tag: MTS20_RS18210
• Genome accession: NZ_CP121586
• Coordinates: 3746304..3747422 (+)
• Length: 372 a.a.
• NCBI ID: WP_000347039.1
• Uniprot ID: -
• Organism: Acinetobacter baumannii strain RAB11
• Function: mediate the depolymerization of the type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3741304..3752422

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MTS20_RS18200 (MTS20_18200)	-	3744420..3745112 (-)	693	WP_001108512.1	YggS family pyridoxal phosphate-dependent enzyme	-
MTS20_RS18205 (MTS20_18205)	pilT	3745239..3746276 (+)	1038	WP_000355489.1	type IV pilus twitching motility protein PilT	Machinery gene
MTS20_RS18210 (MTS20_18210)	pilU	3746304..3747422 (+)	1119	WP_000347039.1	PilT/PilU family type 4a pilus ATPase	Machinery gene
MTS20_RS18215 (MTS20_18215)	fur	3747492..3747929 (-)	438	WP_001122847.1	ferric iron uptake transcriptional regulator	-
MTS20_RS18220 (MTS20_18220)	bamE	3748041..3748439 (+)	399	WP_001170994.1	outer membrane protein assembly factor BamE	-
MTS20_RS18225 (MTS20_18225)	-	3748494..3748817 (-)	324	WP_000442587.1	RnfH family protein	-
MTS20_RS18230 (MTS20_18230)	-	3748817..3749884 (-)	1068	WP_002019572.1	hypothetical protein	-
MTS20_RS18235 (MTS20_18235)	-	3750037..3750492 (-)	456	WP_000782976.1	bacteriohemerythrin	-
MTS20_RS18240 (MTS20_18240)	-	3750745..3751593 (-)	849	WP_000336548.1	class II glutamine amidotransferase	-

Sequence

Protein

• Length: 372 a.a.
• Molecular weight: 41933.13 Da
• Isoelectric Point: 6.6944

>NTDB_id=737940 MTS20_RS18210 WP_000347039.1 3746304..3747422(+) (pilU) [Acinetobacter baumannii strain RAB11]
MDFNDLLNLMVEKKSSDLFITDGVAPSMKINGQIVPISKNSLSGEVIGQLLHSIMSEKQRREFAETRECNFAIMNREKTA
RFRVSAFQQRDMPGMVLRRIETKIPSIDDLQLPPVLKDLSMTKRGIIIFVGATGTGKSTSLASMISHRNHNSKGHIITIE
DPIEFIHEHAGCIITQREVGIDTDSFEIALKNTLRQAPDVILIGEIRSREVMDYAIGFAETGHLVLATMHANNANQALDR
IIHFFESDRHSQLYMDLSLNLKAMIAQQLIPTPDGNSRRAAIEILINSPLISDYIRKGEIHEIKDLMKRSRELGMQTFDQ
ALFDLYKAGQITYKDALKHADSPNDLRLTIKLADEGPDQLSDGKQHLTFDRQ

Nucleotide

• Length: 1119 bp

>NTDB_id=737940 MTS20_RS18210 WP_000347039.1 3746304..3747422(+) (pilU) [Acinetobacter baumannii strain RAB11]
ATGGATTTTAATGACTTGCTCAACCTGATGGTTGAAAAAAAATCTTCCGATCTCTTTATTACAGATGGCGTTGCGCCCTC
TATGAAGATTAACGGGCAAATTGTTCCAATTTCAAAAAACAGTCTTTCTGGGGAAGTGATTGGTCAACTGTTACATTCCA
TCATGAGTGAAAAACAACGCAGAGAATTTGCAGAAACTCGTGAATGTAACTTTGCCATTATGAACCGTGAAAAAACGGCG
CGTTTTCGTGTCAGTGCTTTTCAGCAGCGCGACATGCCGGGCATGGTACTACGTCGTATTGAAACCAAGATTCCTTCAAT
TGATGACTTGCAGTTACCGCCTGTACTTAAAGATTTATCGATGACCAAACGCGGCATTATTATTTTTGTAGGCGCGACAG
GCACAGGTAAATCTACTTCACTGGCTTCAATGATCAGCCATCGTAACCATAACTCTAAGGGCCATATCATTACCATTGAA
GACCCGATTGAGTTTATTCACGAACATGCAGGTTGCATCATTACTCAGCGTGAAGTCGGGATCGATACCGACTCATTTGA
AATTGCCTTGAAAAATACACTACGACAAGCGCCGGATGTGATCTTAATTGGTGAGATCCGTTCTCGTGAAGTCATGGACT
ACGCGATTGGCTTTGCTGAAACAGGCCATCTTGTATTAGCTACCATGCACGCTAACAACGCCAACCAAGCGCTCGACCGT
ATTATTCACTTTTTTGAAAGTGACCGTCATAGTCAGCTTTACATGGACTTGTCACTTAACTTAAAGGCAATGATTGCGCA
GCAGCTCATTCCAACACCAGATGGTAATTCACGCCGTGCAGCAATTGAGATTTTAATTAACTCACCATTAATTTCAGACT
ACATCCGTAAAGGTGAAATTCATGAAATTAAAGATTTGATGAAACGCTCACGTGAACTTGGTATGCAGACCTTTGACCAA
GCTTTATTTGATTTATATAAAGCTGGTCAAATTACCTACAAAGATGCACTTAAACATGCTGACTCACCGAACGATTTACG
TTTAACCATTAAACTTGCAGATGAAGGTCCTGATCAATTATCAGACGGGAAACAGCATTTAACTTTTGACCGCCAGTAA

Domains

Predicted by InterProScan.

• Type II/IV secretion system protein (T2SSE) (31-270)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilU	Acinetobacter baylyi ADP1	75.926	100	0.772
pilU	Pseudomonas stutzeri DSM 10701	69.565	98.925	0.688
pilU	Vibrio cholerae strain A1552	53.243	99.462	0.53
pilT	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	42.486	93.011	0.395