Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   N7L95_RS19880 Genome accession   NZ_CP106951
Coordinates   4442527..4442928 (+) Length   133 a.a.
NCBI ID   WP_301256982.1    Uniprot ID   -
Organism   Eleftheria terrae strain P9846-PB     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 4437527..4447928
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  N7L95_RS19855 (N7L95_19890) - 4438066..4438386 (-) 321 WP_301256978.1 hypothetical protein -
  N7L95_RS19860 (N7L95_19895) - 4438471..4439895 (+) 1425 WP_301256979.1 GH1 family beta-glucosidase -
  N7L95_RS19865 (N7L95_19900) hemL 4439976..4441265 (-) 1290 WP_301256980.1 glutamate-1-semialdehyde 2,1-aminomutase -
  N7L95_RS19870 (N7L95_19905) - 4441255..4442175 (-) 921 WP_301256981.1 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase -
  N7L95_RS19875 (N7L95_19910) - 4442332..4442484 (+) 153 WP_301260194.1 rubredoxin -
  N7L95_RS19880 (N7L95_19915) pilG 4442527..4442928 (+) 402 WP_301256982.1 response regulator Regulator
  N7L95_RS19885 (N7L95_19920) - 4443021..4443386 (+) 366 WP_301256983.1 response regulator -
  N7L95_RS19890 (N7L95_19925) - 4443447..4443986 (+) 540 WP_301256984.1 chemotaxis protein CheW -
  N7L95_RS19895 (N7L95_19930) - 4444014..4446335 (+) 2322 WP_301256985.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14803.94 Da        Isoelectric Point: 5.1826

>NTDB_id=736803 N7L95_RS19880 WP_301256982.1 4442527..4442928(+) (pilG) [Eleftheria terrae strain P9846-PB]
MSSDNATSVDTATKVLVIDDSNTIRRSAEIFLKQGGYQVVLAEDGFDALAKVNDHEPQLIFCDILMPRLDGYQTCAIIKR
NPKFAQVPVIMLSSKDGLFDKARGRMVGSEDYLTKPFTKDQLLQAVEQYSRVA

Nucleotide


Download         Length: 402 bp        

>NTDB_id=736803 N7L95_RS19880 WP_301256982.1 4442527..4442928(+) (pilG) [Eleftheria terrae strain P9846-PB]
GTGAGCAGCGACAACGCTACATCGGTGGATACAGCCACCAAAGTGCTGGTCATCGATGACAGCAACACCATCCGCCGCAG
TGCGGAGATCTTCCTGAAGCAAGGGGGCTATCAGGTGGTGCTTGCAGAAGACGGTTTCGACGCGCTGGCCAAGGTCAATG
ACCATGAGCCGCAGCTGATCTTCTGCGACATCCTGATGCCTCGTCTCGACGGGTATCAGACCTGCGCCATCATCAAGCGC
AATCCCAAGTTCGCGCAGGTGCCGGTCATCATGCTGTCCTCGAAGGACGGCCTGTTCGATAAGGCCCGCGGCCGCATGGT
GGGCTCCGAGGATTACCTGACCAAGCCGTTCACCAAGGACCAGCTGCTCCAGGCCGTGGAGCAGTACAGCCGGGTGGCTT
GA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(15-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

60.345

87.218

0.526
  pilH Synechocystis sp. PCC 6803

41.88

87.97

0.368