Detailed information NTG0736571

Bioinformatically predicted

Overview

• Name: pilC
• Type: Machinery gene
• Locus tag: ND436_RS00265
• Genome accession: NZ_CP106918
• Coordinates: 52447..55467 (-)
• Length: 1006 a.a.
• NCBI ID: WP_322740850.1
• Uniprot ID: -
• Organism: Neisseria gonorrhoeae strain 9071
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 47447..60467

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ND436_RS00245 (ND436_000245)	-	49108..49497 (-)	390	WP_003687278.1	endonuclease domain-containing protein	-
ND436_RS00255 (ND436_000255)	-	49660..50039 (-)	380	Protein_48	VOC family protein	-
ND436_RS00260 (ND436_000260)	carA	50093..51226 (-)	1134	WP_003699436.1	glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit	-
ND436_RS00265 (ND436_000265)	pilC	52447..55467 (-)	3021	WP_322740850.1	PilC family type IV pilus tip adhesin	Machinery gene
ND436_RS12500	pilC	55467..55595 (-)	129	WP_322740851.1	hypothetical protein	Machinery gene
ND436_RS00270 (ND436_000270)	apbC	57317..58396 (-)	1080	WP_003699443.1	iron-sulfur cluster carrier protein ApbC	-
ND436_RS00280 (ND436_000280)	-	58770..59279 (+)	510	WP_003687293.1	protein disulfide oxidoreductase	-
ND436_RS00285 (ND436_000285)	nadR	59620..60060 (+)	441	WP_003687296.1	MarR family adhesin repressor NadR	-

Sequence

Protein

• Length: 1006 a.a.
• Molecular weight: 110119.08 Da
• Isoelectric Point: 9.8878

>NTDB_id=736571 ND436_RS00265 WP_322740850.1 52447..55467(-) (pilC) [Neisseria gonorrhoeae strain 9071]
MNAQNQPEVKSNVPYSIKDKDRKRVFDYTSQKSSLGRTNNFISFNNNDEVVARKNGTVVFGTATYLPPYGKVSGFDADAL
KERANAVDWIRTTRIALAGYSYAGVVCNSTTGCPKLVYKTRFSFDNPDLAKTGSRLNRHTEPSRDNSPIYKLKDYPWLGV
SFNLGAEGTAKDGKVTNKLVSSFDENNSNSNQNLVYTTEGHNISLGNWQRESTAMAYYLNAKLHLLDKKKIKDITSKTVR
LGVLKPSIDVRKGNTGLSGILSFWATWDIKDTGQIPVKLGLPQVKAGRCTNAAHPNPKVKPLSPALTAPALWFGPAQNGK
VQMYSASVSTYPGSSSSRIFLQELKTKTDPGRPGRHSLAALNERDIKSREPNFNSRQTVIRLPGGVYRIAPGNSGRVAGF
NDNDGKNDTFGIYKDRLVIPEPDEWSEVLLPWTARYYGNDDIFKTFNQPNNKKQSDKKQYSQKYRIRTKEDDNDKPRDLG
DIVNSPITAVGGYLATAANDGMVHLFKRNGTDQRGYELKLSYIPGTMPRQYFDNDTSALKDSTLAQELRTFAEKGYVGDR
YGVDGGFVLRRITDDQDRQKHFFMFGAMGLGGRGAYALDLTKIDNSNLTGVSMFDVKNESKNNGVKLGYTVGTPQIGKIR
NGKYAAFLASGYAAKDIVSSDNTTALYVYDLGNGGGSLIKKIEAPGGKGGLSSPTLVDKDLDGIVDIAYAGDRGGNMYRF
DLSGDNPSKWTVRTIFQGTKPITSAPAVSRLADKRVVIFGTGSDLSEQDVVDKDQQYIYGIFDDDKGTVKVTVQNGTGGG
LLEQVLKEENKTLFLNKGSDGSGSKGWVVKLKEGQRVTVKPTVVLRTAFVTIRKYKDDGCGADTAILGINTADGGALTPR
SARPIVPEANKDVAQYSGHKTTSKGKSIPIGCMEKGGKTVCPNGYVYDKPVNVRYLDEKKTDDFPVTADGDAGGSGTFKE
GKKPARNNRCFSGKGVRTLLMNDLDSLDITGPMCGIKRLSWREVFF

Nucleotide

• Length: 3021 bp

>NTDB_id=736571 ND436_RS00265 WP_322740850.1 52447..55467(-) (pilC) [Neisseria gonorrhoeae strain 9071]
ATGAACGCGCAAAACCAGCCCGAGGTAAAGTCGAATGTGCCATATTCAATAAAGGACAAAGACAGGAAGCGGGTATTTGA
CTATACGAGCCAGAAAAGCAGCTTAGGCAGGACAAACAATTTTATCTCATTCAACAATAACGATGAAGTTGTTGCTCGAA
AAAACGGTACTGTCGTTTTTGGCACAGCCACCTACCTGCCGCCCTACGGCAAGGTTTCCGGTTTTGATGCCGACGCTCTG
AAAGAGCGCGCCAATGCCGTTGATTGGATTCGTACCACCCGCATCGCGCTGGCAGGCTACAGCTACGCCGGTGTCGTATG
CAACAGCACCACAGGCTGTCCCAAACTTGTCTATAAAACCCGATTTTCCTTCGATAATCCCGACTTGGCAAAAACAGGAA
GCAGGCTGAATAGGCACACAGAGCCAAGCCGCGACAATTCGCCCATTTACAAATTGAAGGATTATCCATGGTTGGGCGTG
TCTTTCAATTTGGGCGCCGAGGGTACCGCCAAAGATGGTAAGGTAACCAACAAATTGGTATCTTCTTTTGATGAAAACAA
TAGTAATAGTAATCAAAACCTCGTCTATACCACGGAAGGCCACAATATTTCCTTGGGCAACTGGCAGCGCGAAAGTACCG
CCATGGCCTATTATCTGAACGCCAAACTGCACCTGCTGGACAAAAAAAAGATTAAAGATATCACCAGCAAAACAGTGCGG
TTGGGTGTCTTGAAGCCGAGCATCGATGTGCGGAAAGGAAATACGGGGCTTAGCGGCATTCTATCTTTTTGGGCTACGTG
GGACATTAAAGATACCGGGCAGATTCCGGTCAAGCTCGGCCTGCCGCAAGTCAAAGCCGGGCGCTGCACCAACGCCGCCC
ACCCCAATCCCAAGGTCAAACCCCTTTCGCCGGCACTGACCGCCCCCGCGCTGTGGTTCGGCCCTGCGCAAAATGGCAAG
GTGCAGATGTATTCCGCTTCGGTTTCTACCTACCCCGGCAGTTCGAGCAGCCGCATCTTCCTCCAAGAGCTGAAAACTAA
AACCGACCCCGGCAGGCCCGGCCGGCATTCCCTCGCCGCTTTGAATGAACGAGATATCAAATCCCGCGAGCCGAATTTCA
ACTCAAGGCAGACCGTCATCCGATTGCCGGGCGGCGTGTACCGGATCGCCCCGGGCAATAGCGGCCGGGTCGCGGGTTTT
AATGACAATGACGGCAAAAACGACACTTTCGGCATCTACAAGGACAGGCTCGTCATACCTGAGCCCGACGAGTGGAGCGA
AGTGCTGCTGCCTTGGACGGCCCGGTATTACGGTAATGACGATATATTTAAAACATTCAACCAACCAAACAACAAAAAAC
AAAGCGACAAAAAACAATACAGCCAAAAATACCGCATCCGCACAAAAGAAGATGACAATGACAAACCCCGCGATTTGGGC
GACATCGTCAACAGCCCGATAACGGCGGTCGGCGGGTATCTGGCAACCGCCGCGAACGACGGGATGGTGCACCTGTTTAA
AAGAAACGGCACAGACCAACGAGGCTACGAACTGAAGCTCAGCTACATCCCCGGCACGATGCCGCGCCAATATTTTGATA
ACGACACTTCCGCTCTCAAAGACTCCACCCTCGCCCAAGAGCTGCGCACCTTTGCCGAAAAAGGCTATGTGGGCGACCGC
TACGGCGTGGACGGCGGCTTTGTCTTGCGCCGCATTACAGATGACCAGGACAGGCAAAAACATTTCTTTATGTTTGGTGC
GATGGGCCTTGGCGGCAGAGGCGCATACGCCTTGGATTTGACCAAAATCGACAACAGCAACCTGACCGGCGTTTCCATGT
TTGATGTCAAAAACGAGAGTAAAAATAATGGCGTGAAATTAGGCTACACCGTCGGTACGCCGCAAATCGGCAAAATCCGC
AACGGCAAATACGCCGCCTTCCTCGCCTCCGGTTATGCGGCTAAAGATATTGTCAGCAGCGATAATACAACCGCGCTGTA
TGTGTATGATTTGGGAAACGGCGGTGGTAGTCTGATTAAAAAAATCGAAGCACCCGGCGGCAAAGGCGGGCTTTCGTCCC
CCACGCTGGTGGATAAAGATTTAGACGGCATTGTCGATATCGCCTATGCCGGCGACCGGGGCGGCAATATGTACCGCTTT
GATTTGAGCGGCGACAATCCGTCCAAATGGACTGTACGCACTATTTTCCAAGGCACAAAACCGATTACCTCCGCGCCCGC
CGTTTCCCGACTGGCAGACAAACGCGTGGTCATCTTCGGTACGGGCAGCGATTTGAGTGAACAGGATGTAGTCGATAAGG
ATCAACAATATATTTACGGTATCTTTGACGACGATAAGGGGACGGTTAAGGTAACGGTACAAAACGGCACGGGAGGCGGG
CTGCTCGAGCAAGTGCTTAAAGAGGAAAATAAAACATTATTCCTGAACAAGGGATCCGACGGATCGGGCAGTAAGGGGTG
GGTAGTGAAGCTGAAGGAAGGACAGCGCGTTACCGTCAAACCGACCGTGGTATTGCGTACCGCCTTCGTAACCATCCGCA
AGTATAAAGACGACGGCTGCGGCGCGGATACCGCCATTTTGGGCATCAATACCGCCGACGGCGGCGCATTGACTCCGAGA
AGCGCGCGCCCGATTGTGCCGGAAGCCAATAAGGATGTCGCACAATATTCCGGCCATAAGACAACCTCCAAAGGCAAATC
CATCCCTATAGGTTGTATGGAAAAAGGCGGTAAAACCGTCTGCCCGAACGGATATGTTTACGACAAGCCGGTTAATGTGC
GTTATCTGGACGAAAAGAAAACAGACGATTTCCCCGTCACGGCAGACGGTGATGCAGGCGGCAGCGGAACATTCAAAGAG
GGTAAAAAACCCGCCCGCAATAACCGGTGCTTCTCCGGAAAAGGTGTGCGCACCCTGCTGATGAACGATTTGGACAGCTT
GGATATTACCGGCCCGATGTGCGGTATCAAACGCTTAAGCTGGCGCGAAGTCTTCTTCTGA

Domains

Predicted by InterproScan.

• Neisseria PilC beta-propeller domain (T4P_PilY1) (479-815)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilC	Neisseria meningitidis A1493	68.137	100	0.691