Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   P7F77_RS01955 Genome accession   NZ_CP121204
Coordinates   431850..432695 (+) Length   281 a.a.
NCBI ID   WP_001621659.1    Uniprot ID   -
Organism   Staphylococcus aureus strain SA0907     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 426850..437695
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P7F77_RS01940 (P7F77_01940) - 427118..428959 (-) 1842 WP_031874980.1 bifunctional homocysteine S-methyltransferase/methylenetetrahydrofolate reductase -
  P7F77_RS01945 (P7F77_01945) metC 428928..430088 (-) 1161 WP_000175862.1 cystathionine beta-lyase MetC -
  P7F77_RS01950 (P7F77_01950) - 430085..431188 (-) 1104 WP_000655697.1 PLP-dependent transferase -
  P7F77_RS01955 (P7F77_01955) spo0J 431850..432695 (+) 846 WP_001621659.1 ParB/RepB/Spo0J family partition protein Regulator
  P7F77_RS01960 (P7F77_01960) - 432849..433730 (+) 882 WP_000373079.1 mechanosensitive ion channel family protein -
  P7F77_RS01965 (P7F77_01965) - 433760..433963 (+) 204 WP_000157348.1 DUF951 domain-containing protein -
  P7F77_RS01970 (P7F77_01970) ychF 433975..435072 (+) 1098 WP_031874981.1 redox-regulated ATPase YchF -
  P7F77_RS01975 (P7F77_01975) - 435158..435349 (-) 192 WP_001052483.1 hypothetical protein -
  P7F77_RS01980 (P7F77_01980) rpsF 435593..435889 (+) 297 WP_001261460.1 30S ribosomal protein S6 -
  P7F77_RS01985 (P7F77_01985) ssbA 435910..436413 (+) 504 WP_000934799.1 single-stranded DNA-binding protein Machinery gene
  P7F77_RS01990 (P7F77_01990) rpsR 436465..436707 (+) 243 WP_000897044.1 30S ribosomal protein S18 -

Sequence

Protein


Download         Length: 281 a.a.        Molecular weight: 32797.82 Da        Isoelectric Point: 10.0000

>NTDB_id=736382 P7F77_RS01955 WP_001621659.1 431850..432695(+) (spo0J) [Staphylococcus aureus strain SA0907]
MSELSKSEDQRITKTKDEQIKQIDISDIKPNPYQPRKTFDENHLNDLADSIKQYGILQPIVLRKTVQGYYIVVGERRFRA
SKIAGLKYVSAIIKDLTDEDMMELAVIENLQREDLNAIEEAESYQRLMTDLKITQQEVAKRLSKSRPYIANMLRLLHLPK
KIADMVKDGRLTSAHGRTLLAIKDEQQMLRLAKRVVKEKWSVRYLENHVNELKNVSSKSETDKVDITKPKFIKQQERQLR
EQYGAKVDISIKKSVGKISFEFESQDDFVRIIEQLNRKYGK

Nucleotide


Download         Length: 846 bp        

>NTDB_id=736382 P7F77_RS01955 WP_001621659.1 431850..432695(+) (spo0J) [Staphylococcus aureus strain SA0907]
GTGAGTGAATTGTCAAAAAGTGAAGATCAACGTATTACTAAAACAAAAGATGAACAAATTAAGCAAATAGATATATCGGA
TATCAAACCGAATCCGTATCAGCCCCGAAAAACTTTCGATGAAAATCATTTAAATGATTTGGCAGATTCAATTAAGCAAT
ATGGTATTTTGCAACCAATTGTGCTTAGAAAAACAGTTCAAGGTTATTACATTGTAGTTGGTGAAAGAAGGTTTAGAGCT
TCGAAAATTGCTGGTCTAAAATACGTATCAGCGATTATCAAAGATTTAACAGATGAAGATATGATGGAACTGGCGGTCAT
CGAAAATTTACAACGAGAAGACTTAAATGCGATTGAAGAAGCTGAAAGTTATCAACGTTTGATGACAGATTTGAAAATTA
CACAACAAGAAGTAGCGAAGCGATTGAGTAAGTCGCGCCCGTATATAGCGAATATGTTGAGGTTATTACATTTACCGAAA
AAGATTGCTGACATGGTAAAAGATGGGCGACTGACAAGTGCACATGGACGAACGTTATTGGCAATTAAAGATGAACAACA
AATGCTTAGGTTAGCGAAACGGGTTGTTAAAGAAAAGTGGAGTGTTAGATATTTAGAAAACCATGTTAATGAATTAAAAA
ATGTTTCGTCAAAGTCGGAAACAGACAAAGTAGATATAACTAAGCCTAAATTTATAAAGCAACAAGAACGACAGTTGCGA
GAACAGTATGGCGCAAAAGTAGATATATCGATAAAAAAATCAGTCGGCAAAATCTCATTTGAGTTTGAATCGCAAGATGA
CTTTGTGAGAATCATTGAACAATTAAATCGTAAGTATGGTAAATAG

Domains

Predicted by InterProScan.

ParB/Sulfiredoxin domain (ParB_N)

(22-109)

HTH domain found in ParB protein (HTH_ParB)

(161-210)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

40.996

92.883

0.381