Detailed information NTG0736270

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: N9E61_RS16765
• Genome accession: NZ_CP106872
• Coordinates: 3394872..3396035 (-)
• Length: 387 a.a.
• NCBI ID: WP_007407484.1
• Uniprot ID: A3KLC1
• Organism: Bacillus velezensis strain STJ-6
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3389872..3401035

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
N9E61_RS16735 (N9E61_16735)	-	3390136..3390555 (-)	420	WP_012118571.1	TIGR03826 family flagellar region protein	-
N9E61_RS16740 (N9E61_16740)	comFC	3390629..3391318 (-)	690	WP_196770545.1	phosphoribosyltransferase family protein	Machinery gene
N9E61_RS16745 (N9E61_16745)	-	3391324..3391608 (-)	285	WP_003151389.1	late competence development ComFB family protein	-
N9E61_RS16750 (N9E61_16750)	comFA	3391666..3393051 (-)	1386	WP_032876163.1	DEAD/DEAH box helicase	Machinery gene
N9E61_RS16755 (N9E61_16755)	-	3393160..3394008 (-)	849	WP_032876160.1	DegV family protein	-
N9E61_RS16760 (N9E61_16760)	degU	3394106..3394795 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
N9E61_RS16765 (N9E61_16765)	degS	3394872..3396035 (-)	1164	WP_007407484.1	two-component sensor histidine kinase DegS	Regulator
N9E61_RS16770 (N9E61_16770)	-	3396258..3396905 (+)	648	WP_007614107.1	YigZ family protein	-
N9E61_RS16775 (N9E61_16775)	-	3396910..3398091 (+)	1182	WP_032876157.1	LCP family protein	-
N9E61_RS16780 (N9E61_16780)	-	3398190..3399266 (-)	1077	WP_003151382.1	glycosyltransferase family 4 protein	-
N9E61_RS16785 (N9E61_16785)	-	3399399..3400595 (-)	1197	WP_032876154.1	glycosyltransferase	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45014.78 Da
• Isoelectric Point: 6.8616

>NTDB_id=736270 N9E61_RS16765 WP_007407484.1 3394872..3396035(-) (degS) [Bacillus velezensis strain STJ-6]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENQRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TADFVVLIIKDNGKGFDIKDAKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=736270 N9E61_RS16765 WP_007407484.1 3394872..3396035(-) (degS) [Bacillus velezensis strain STJ-6]
ATGAATAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGCAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTTGAAGAACTCAAACAGATCAAACAGCAGG
TGTACGAAGTCATTGAGCTGGGCGACAAACTTGAAGTTCATACGCGGCACGCACGAAACCGCTTGTCTGAAGTAAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAGCAGCGTGAAAAGCAGCTGCGGGAGCGCAGAGATGATTTAGAACGCCGGCTTTTGGGGCTTCAGGAAATTATTGAAC
GGTCAGAATCATTGGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGCCAAGTAGGGCTTCTTCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGTTTAAGAATCATTGAAGCCCAAGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCCGCGCAAATGCTGGCAAATGTCATGATGAGATCGGAATTAATTGAACGGATCTTCCGCGACCGCG
GCACGGAGGACGGATTTCAGGAAATCAGAAATCTACGGCAGAATGTGCGGAATGCCCTTTACGAAGTCAGAAGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCGACACTGAGAAAATATCTTTATACAACTGAAGAATA
CAACGGAAAGGTGAAAATACATTTTCAGTGCATCGGAGACACAGAGAACCAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCACTCAAGCATTCAGAATCAGAGGAAATTACAGTAAAAGTGGAAGTA
ACCGCTGATTTTGTCGTTCTCATCATTAAGGACAATGGAAAAGGCTTTGATATTAAGGATGCTAAACAAAAGAAAAACAA
GTCATTCGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTTGAAGGAACGATAACGATAGACTCTAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

3D structure

• AlphaFold DB: A3KLC1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.584	99.483	0.951