Detailed information NTG0736242

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: P8R99_RS07320
• Genome accession: NZ_CP121160
• Coordinates: 1362696..1363805 (-)
• Length: 369 a.a.
• NCBI ID: WP_278043257.1
• Uniprot ID: -
• Organism: Streptococcus agalactiae strain S5
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1357696..1368805

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
P8R99_RS07295	-	1358212..1358892 (+)	681	WP_000628848.1	Crp/Fnr family transcriptional regulator	-
P8R99_RS07300	-	1358902..1359387 (+)	486	WP_001034427.1	arginine repressor	-
P8R99_RS07305	guaB	1359544..1361025 (+)	1482	WP_000073440.1	IMP dehydrogenase	-
P8R99_RS07310	-	1361100..1361762 (+)	663	WP_001865840.1	helix-turn-helix transcriptional regulator	-
P8R99_RS07315	-	1361818..1362684 (+)	867	WP_000398683.1	GRP family sugar transporter	-
P8R99_RS07320	recF	1362696..1363805 (-)	1110	WP_278043257.1	DNA replication/repair protein RecF	Machinery gene
P8R99_RS07325	yaaA	1363808..1364161 (-)	354	WP_000384867.1	S4 domain-containing protein YaaA	-
P8R99_RS07330	-	1364400..1365644 (+)	1245	WP_000706188.1	pitrilysin family protein	-
P8R99_RS07335	-	1365646..1366929 (+)	1284	WP_000217765.1	pitrilysin family protein	-
P8R99_RS07340	pgsA	1367052..1367594 (+)	543	WP_000239222.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
P8R99_RS07345	-	1367594..1368433 (+)	840	WP_000181757.1	energy-coupling factor ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 369 a.a.
• Molecular weight: 42583.50 Da
• Isoelectric Point: 8.4013

>NTDB_id=736242 P8R99_RS07320 WP_278043257.1 1362696..1363805(-) (recF) [Streptococcus agalactiae strain S5]
MWIKNISLKHYRNYEEAQVDFSPNLNIFIGRNAQGKTNFLEAIYFLALTRSHRTRSDKELVHFKHHDVQITGEVIRKSGH
LSLDIQLSEKGRITKVNHLKQAKLSDYIGAMTVVLFAPEDLQLVKGAPSLRRKFLDIDIGQIKPTYLAELSNYNHVLKQR
NTYLKTTNNVDKTFLSVLDEQLADYGSRVIEHRFDFIQALNDEADKHHYIISTELEHLSIHYKSSIEFTDKSSIREHFLN
QLSKSHSRDIFKKNTSIGPHRDDITFFINDINATFGSQGQQRSLILSLKLAEIELIKTVTNDYPILLLDDVMSELDNHRQ
LKLLERIKKNVQTFITTTSLEHLSALPDQLKIFNISDGTISINEKKATD

Nucleotide

• Length: 1110 bp

>NTDB_id=736242 P8R99_RS07320 WP_278043257.1 1362696..1363805(-) (recF) [Streptococcus agalactiae strain S5]
ATGTGGATAAAAAATATTTCTTTAAAACATTATCGTAATTATGAAGAAGCACAAGTAGATTTTTCACCCAACCTCAATAT
TTTCATTGGCCGCAATGCTCAAGGAAAGACAAATTTTTTAGAAGCAATCTACTTCTTGGCTTTGACTCGAAGTCATCGTA
CCCGTTCTGATAAAGAACTTGTACATTTTAAACACCATGATGTACAAATTACAGGTGAGGTAATCCGCAAAAGCGGCCAT
CTTAGCTTAGATATTCAATTATCTGAAAAAGGAAGAATCACTAAGGTTAACCATCTTAAACAGGCAAAATTATCTGATTA
TATTGGGGCTATGACTGTCGTACTTTTTGCCCCTGAAGATCTTCAATTAGTTAAAGGTGCACCTAGCCTAAGACGGAAAT
TTTTAGATATAGATATTGGACAAATTAAGCCAACGTACTTAGCTGAACTTTCAAATTACAATCATGTATTAAAACAAAGA
AACACTTATCTAAAAACTACTAATAACGTCGACAAAACTTTTTTATCAGTCCTTGATGAACAATTAGCTGATTATGGAAG
TCGTGTCATTGAACACCGTTTTGATTTTATCCAAGCCCTAAATGATGAAGCGGACAAGCATCACTACATTATCAGTACTG
AGTTAGAACATTTATCTATTCACTACAAATCGTCAATAGAGTTTACAGATAAGTCAAGTATTAGGGAACATTTTTTAAAC
CAATTATCTAAAAGCCACTCAAGAGACATCTTTAAGAAAAACACAAGCATCGGGCCTCATCGTGATGATATTACTTTCTT
TATTAATGATATCAATGCTACTTTTGGTAGCCAAGGGCAACAAAGAAGCCTTATTTTATCATTGAAATTAGCAGAAATTG
AGCTAATAAAAACCGTTACCAACGATTATCCGATTCTCTTACTTGACGACGTTATGAGTGAACTTGACAACCATCGTCAA
CTAAAACTCTTAGAGAGAATCAAAAAGAATGTTCAAACATTTATTACTACAACAAGTTTAGAACATTTAAGTGCTTTACC
TGATCAACTCAAAATCTTTAACATTAGTGATGGTACTATTAGTATTAATGAAAAAAAAGCAACAGATTAA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-358)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	63.912	98.374	0.629
recF	Bacillus subtilis subsp. subtilis str. 168	44.565	99.729	0.444