Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   P8R99_RS01380 Genome accession   NZ_CP121160
Coordinates   239251..239919 (-) Length   222 a.a.
NCBI ID   WP_000076365.1    Uniprot ID   -
Organism   Streptococcus agalactiae strain S5     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 234251..244919
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P8R99_RS01360 - 234284..235057 (+) 774 WP_000622403.1 DUF3307 domain-containing protein -
  P8R99_RS01365 - 235090..236751 (-) 1662 WP_000093971.1 peptide ABC transporter substrate-binding protein -
  P8R99_RS01370 xerS 237203..238273 (+) 1071 WP_000817926.1 tyrosine recombinase XerS Machinery gene
  P8R99_RS01375 - 238316..239254 (-) 939 WP_278043327.1 sensor histidine kinase -
  P8R99_RS01380 braR 239251..239919 (-) 669 WP_000076365.1 response regulator transcription factor Regulator
  P8R99_RS01385 - 240029..241984 (-) 1956 WP_000499554.1 FtsX-like permease family protein -
  P8R99_RS01390 - 241986..242738 (-) 753 WP_000923535.1 ABC transporter ATP-binding protein -
  P8R99_RS01395 - 242764..243726 (-) 963 WP_001253130.1 S41 family peptidase -
  P8R99_RS01400 - 243892..244380 (+) 489 WP_001140790.1 PASTA domain-containing protein -

Sequence

Protein


Download         Length: 222 a.a.        Molecular weight: 25331.39 Da        Isoelectric Point: 5.3008

>NTDB_id=736193 P8R99_RS01380 WP_000076365.1 239251..239919(-) (braR) [Streptococcus agalactiae strain S5]
MSQDQGKIYIVEDDMTIVSLLKGHLSASYHVSSVSNFRDVKQEIIAFQPDLILMDITLPYFNGFYWTAELRKFLTIPIIF
ISSSNDEMDMVMALNMGGDDFISKPFSLAVLDAKLTAILRRSQQFIQQELTFGGFTLTREGLLSSQDKEVILSPTENKIL
SILLMHPKQVVSKESLLEKLWENDSFIDQNTLNVNMTRLRKKIVPIGFDYIHTVRGVGYLLQ

Nucleotide


Download         Length: 669 bp        

>NTDB_id=736193 P8R99_RS01380 WP_000076365.1 239251..239919(-) (braR) [Streptococcus agalactiae strain S5]
ATGTCACAAGATCAAGGAAAAATTTATATTGTAGAAGATGATATGACGATTGTGTCACTTTTAAAAGGCCATTTATCAGC
TAGCTATCATGTCTCTAGTGTCAGCAATTTTCGTGATGTGAAACAAGAAATTATCGCATTTCAACCCGATTTGATACTAA
TGGATATTACGTTACCCTATTTTAATGGTTTTTACTGGACTGCAGAATTGCGTAAGTTTTTAACAATTCCTATTATTTTC
ATTTCATCTAGTAATGATGAAATGGATATGGTTATGGCATTAAATATGGGGGGTGATGACTTTATTTCAAAACCATTCTC
TCTAGCTGTATTAGATGCTAAGCTAACTGCTATTTTAAGGAGAAGTCAACAATTTATCCAACAGGAATTAACTTTTGGGG
GATTTACGTTGACAAGAGAAGGGTTATTGTCTAGCCAAGATAAAGAGGTTATTTTATCGCCAACAGAAAATAAAATCCTA
TCTATCTTGCTCATGCATCCTAAACAAGTAGTCTCAAAAGAGTCTCTATTAGAGAAACTTTGGGAAAATGATAGTTTTAT
TGATCAAAATACACTTAATGTTAATATGACACGCTTACGTAAAAAAATTGTCCCAATAGGTTTTGATTACATTCATACAG
TGAGAGGAGTAGGGTATTTACTACAATGA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(148-221)

Response regulator receiver domain (Response_reg)

(8-115)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

47.248

98.198

0.464