Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   P8R98_RS07120 Genome accession   NZ_CP121159
Coordinates   1419204..1419872 (-) Length   222 a.a.
NCBI ID   WP_278043413.1    Uniprot ID   -
Organism   Streptococcus agalactiae strain S1     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1414204..1424872
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P8R98_RS07100 - 1414294..1415061 (+) 768 WP_278043411.1 DUF3307 domain-containing protein -
  P8R98_RS07105 - 1415027..1416697 (-) 1671 WP_278043412.1 peptide ABC transporter substrate-binding protein -
  P8R98_RS07110 xerS 1417156..1418226 (+) 1071 WP_161501862.1 tyrosine recombinase XerS Machinery gene
  P8R98_RS07115 - 1418269..1419207 (-) 939 WP_000620982.1 sensor histidine kinase -
  P8R98_RS07120 braR 1419204..1419872 (-) 669 WP_278043413.1 response regulator transcription factor Regulator
  P8R98_RS07125 - 1419982..1421937 (-) 1956 WP_069986755.1 FtsX-like permease family protein -
  P8R98_RS07130 - 1421939..1422691 (-) 753 WP_069986191.1 ABC transporter ATP-binding protein -
  P8R98_RS07135 - 1422717..1423679 (-) 963 WP_001253125.1 S41 family peptidase -
  P8R98_RS07140 - 1423845..1424333 (+) 489 WP_001140791.1 PASTA domain-containing protein -

Sequence

Protein


Download         Length: 222 a.a.        Molecular weight: 25347.43 Da        Isoelectric Point: 5.3008

>NTDB_id=736133 P8R98_RS07120 WP_278043413.1 1419204..1419872(-) (braR) [Streptococcus agalactiae strain S1]
MSQDQGKIYIVEDDMTIVSLLKGHLSASYHVSSVSNFRDVKQEIIAFQPDLILMDITLPYFNGFYWTAELRKFLTIPIIF
ISSSNDEMDMVMALNMGGDDFISKPFSLAVLDAKLTAILRRSQQFIQQELTFGGFTLTREGLLSSQDKEVILSPTENKIL
SILLMHPKQVVSKESLLEKLWENDSFIDQNTLNVNMTRLRKKIVLIGFDYIHTVRGVGYLLQ

Nucleotide


Download         Length: 669 bp        

>NTDB_id=736133 P8R98_RS07120 WP_278043413.1 1419204..1419872(-) (braR) [Streptococcus agalactiae strain S1]
ATGTCACAAGATCAAGGAAAAATTTATATTGTAGAAGATGATATGACGATTGTGTCACTTTTAAAAGGCCATTTATCAGC
TAGCTATCATGTCTCTAGTGTCAGCAATTTTCGTGATGTGAAACAAGAAATTATCGCATTTCAACCCGATTTGATACTAA
TGGATATTACGTTACCCTATTTTAATGGTTTTTACTGGACTGCAGAATTGCGTAAGTTTTTAACAATTCCTATTATTTTC
ATTTCATCTAGTAATGATGAAATGGATATGGTTATGGCATTAAATATGGGGGGTGATGACTTTATTTCAAAACCATTCTC
TCTAGCTGTATTAGATGCTAAGCTAACTGCTATTTTAAGGAGAAGTCAACAATTTATCCAACAGGAATTAACTTTTGGAG
GATTTACGTTGACAAGAGAAGGGTTATTGTCTAGCCAAGATAAGGAGGTTATTTTATCGCCAACAGAAAATAAAATCCTA
TCTATCTTGCTCATGCATCCTAAACAAGTAGTCTCAAAAGAGTCTCTATTAGAGAAACTTTGGGAAAATGATAGTTTTAT
TGATCAAAATACACTTAATGTTAATATGACACGCTTACGTAAAAAAATTGTCCTAATAGGTTTTGATTACATTCATACAG
TGAGAGGAGTTGGGTATTTACTACAATGA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(8-115)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(148-221)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

47.248

98.198

0.464