Detailed information
Overview
| Name | pilJ | Type | Machinery gene |
| Locus tag | NDL70_RS02350 | Genome accession | NZ_CP106824 |
| Coordinates | 452867..453826 (+) | Length | 319 a.a. |
| NCBI ID | WP_229940798.1 | Uniprot ID | - |
| Organism | Neisseria gonorrhoeae strain 9399 | ||
| Function | type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 447867..458826
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NDL70_RS02325 (NDL70_02325) | - | 448516..449025 (+) | 510 | WP_003687909.1 | isoprenylcysteine carboxyl methyltransferase family protein | - |
| NDL70_RS02330 (NDL70_02330) | - | 449257..449838 (-) | 582 | WP_003690895.1 | superoxide dismutase | - |
| NDL70_RS02335 (NDL70_02335) | dnaB | 450002..451408 (+) | 1407 | WP_003699622.1 | replicative DNA helicase | - |
| NDL70_RS02340 (NDL70_02340) | pilH | 451562..452227 (+) | 666 | WP_229940797.1 | Tfp pilus assembly protein FimT/FimU | Machinery gene |
| NDL70_RS02345 (NDL70_02345) | pilV | 452259..452870 (+) | 612 | WP_003699626.1 | type IV pilus modification protein PilV | Machinery gene |
| NDL70_RS02350 (NDL70_02350) | pilJ | 452867..453826 (+) | 960 | WP_229940798.1 | PilW family protein | Machinery gene |
| NDL70_RS02355 (NDL70_02355) | pilK | 453805..454416 (+) | 612 | WP_033911077.1 | PilX N-terminal domain-containing pilus assembly protein | Machinery gene |
| NDL70_RS02360 (NDL70_02360) | pilL | 454418..454891 (+) | 474 | WP_229940840.1 | PilX family type IV pilin | Machinery gene |
| NDL70_RS02365 (NDL70_02365) | - | 454961..455269 (-) | 309 | WP_025456177.1 | AzlD family protein | - |
| NDL70_RS02370 (NDL70_02370) | - | 455266..455976 (-) | 711 | Protein_465 | AzlC family ABC transporter permease | - |
| NDL70_RS02375 (NDL70_02375) | dut | 456142..456594 (+) | 453 | WP_003699637.1 | dUTP diphosphatase | - |
| NDL70_RS02380 (NDL70_02380) | dapC | 456670..457857 (+) | 1188 | WP_229931672.1 | succinyldiaminopimelate transaminase | - |
| NDL70_RS02385 (NDL70_02385) | yaaA | 458013..458792 (+) | 780 | WP_003699641.1 | peroxide stress protein YaaA | - |
Sequence
Protein
Download Length: 319 a.a. Molecular weight: 35090.78 Da Isoelectric Point: 9.1777
>NTDB_id=735858 NDL70_RS02350 WP_229940798.1 452867..453826(+) (pilJ) [Neisseria gonorrhoeae strain 9399]
MKRKMLNVPKGGYDGMKGFTIVEFLVAGLLSVIVLIAVVSSYFTSRKLNDAANERLAEQQDLRNAATLIVRDARMAGSFG
CFNMSEHTGNDVVSNVAQKNALFYLKRNSTNSTNSTNSTNKLIPITESPNINYQKFFQVSSALIFQYGIDDVNASAATTV
VSSCAAISKPGKQIPTLEDAKKELKIVSQDKEQNGNIARQRHVVNAYAVGRIADEQGLFRFQLNEKGEWGNPQLLAKKIK
RMRVRYIYVSDCPEDEDAGKEEQFKYTDKFDSSVTPAGVEVLLDSGGDAKIAASSDNIIYAYRINATIRGGNVCANRTL
MKRKMLNVPKGGYDGMKGFTIVEFLVAGLLSVIVLIAVVSSYFTSRKLNDAANERLAEQQDLRNAATLIVRDARMAGSFG
CFNMSEHTGNDVVSNVAQKNALFYLKRNSTNSTNSTNSTNKLIPITESPNINYQKFFQVSSALIFQYGIDDVNASAATTV
VSSCAAISKPGKQIPTLEDAKKELKIVSQDKEQNGNIARQRHVVNAYAVGRIADEQGLFRFQLNEKGEWGNPQLLAKKIK
RMRVRYIYVSDCPEDEDAGKEEQFKYTDKFDSSVTPAGVEVLLDSGGDAKIAASSDNIIYAYRINATIRGGNVCANRTL
Nucleotide
Download Length: 960 bp
>NTDB_id=735858 NDL70_RS02350 WP_229940798.1 452867..453826(+) (pilJ) [Neisseria gonorrhoeae strain 9399]
ATGAAACGTAAAATGCTAAACGTACCAAAGGGCGGTTATGATGGTATGAAGGGTTTTACCATTGTTGAATTTCTGGTTGC
GGGCCTGCTCAGTGTGATTGTCCTGATAGCGGTCGTATCGAGTTACTTTACATCCCGGAAATTAAATGATGCGGCAAACG
AGCGTCTTGCCGAGCAACAGGATTTGCGGAATGCGGCAACATTGATTGTCCGCGATGCAAGAATGGCGGGGAGCTTCGGT
TGTTTCAATATGTCTGAGCATACCGGAAATGATGTTGTTTCCAATGTGGCGCAAAAAAACGCTCTTTTTTACTTAAAAAG
GAACAGTACAAACAGTACAAACAGTACAAACAGTACAAATAAACTTATCCCCATAACGGAATCTCCAAATATCAATTATC
AGAAATTTTTCCAGGTTAGTAGCGCATTGATTTTTCAATACGGAATCGATGATGTTAATGCAAGCGCCGCGACTACCGTC
GTCAGCAGCTGTGCCGCAATATCGAAACCGGGCAAGCAAATCCCTACTTTAGAAGATGCAAAAAAAGAATTGAAGATTGT
GAGTCAGGATAAGGAGCAAAATGGCAATATAGCGCGTCAAAGGCATGTGGTCAATGCCTATGCGGTCGGCAGGATTGCCG
ATGAGCAAGGTTTGTTCCGCTTCCAATTGAATGAAAAGGGTGAGTGGGGTAATCCTCAGTTGCTCGCGAAAAAGATTAAA
CGTATGAGAGTGCGGTATATCTATGTTTCCGATTGTCCTGAAGATGAAGATGCCGGCAAAGAGGAACAATTCAAATATAC
GGATAAATTCGACAGCTCTGTTACGCCTGCCGGGGTGGAGGTTTTATTGGATAGCGGTGGTGATGCCAAGATTGCCGCTT
CTTCAGATAATATTATTTATGCTTACCGTATCAATGCGACAATACGCGGGGGAAATGTATGCGCAAACAGAACGCTTTGA
ATGAAACGTAAAATGCTAAACGTACCAAAGGGCGGTTATGATGGTATGAAGGGTTTTACCATTGTTGAATTTCTGGTTGC
GGGCCTGCTCAGTGTGATTGTCCTGATAGCGGTCGTATCGAGTTACTTTACATCCCGGAAATTAAATGATGCGGCAAACG
AGCGTCTTGCCGAGCAACAGGATTTGCGGAATGCGGCAACATTGATTGTCCGCGATGCAAGAATGGCGGGGAGCTTCGGT
TGTTTCAATATGTCTGAGCATACCGGAAATGATGTTGTTTCCAATGTGGCGCAAAAAAACGCTCTTTTTTACTTAAAAAG
GAACAGTACAAACAGTACAAACAGTACAAACAGTACAAATAAACTTATCCCCATAACGGAATCTCCAAATATCAATTATC
AGAAATTTTTCCAGGTTAGTAGCGCATTGATTTTTCAATACGGAATCGATGATGTTAATGCAAGCGCCGCGACTACCGTC
GTCAGCAGCTGTGCCGCAATATCGAAACCGGGCAAGCAAATCCCTACTTTAGAAGATGCAAAAAAAGAATTGAAGATTGT
GAGTCAGGATAAGGAGCAAAATGGCAATATAGCGCGTCAAAGGCATGTGGTCAATGCCTATGCGGTCGGCAGGATTGCCG
ATGAGCAAGGTTTGTTCCGCTTCCAATTGAATGAAAAGGGTGAGTGGGGTAATCCTCAGTTGCTCGCGAAAAAGATTAAA
CGTATGAGAGTGCGGTATATCTATGTTTCCGATTGTCCTGAAGATGAAGATGCCGGCAAAGAGGAACAATTCAAATATAC
GGATAAATTCGACAGCTCTGTTACGCCTGCCGGGGTGGAGGTTTTATTGGATAGCGGTGGTGATGCCAAGATTGCCGCTT
CTTCAGATAATATTATTTATGCTTACCGTATCAATGCGACAATACGCGGGGGAAATGTATGCGCAAACAGAACGCTTTGA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilJ | Neisseria gonorrhoeae MS11 |
92.163 |
100 |
0.922 |