Detailed information NTG0735835

Bioinformatically predicted

Overview

• Name: pilC
• Type: Machinery gene
• Locus tag: NDQ80_RS10245
• Genome accession: NZ_CP106821
• Coordinates: 1951219..1954179 (-)
• Length: 986 a.a.
• NCBI ID: WP_317629742.1
• Uniprot ID: -
• Organism: Neisseria gonorrhoeae strain 10529
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1946219..1959179

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NDQ80_RS10235 (NDQ80_10250)	yccS	1947395..1949545 (+)	2151	WP_003692098.1	YccS family putative transporter	-
NDQ80_RS10240 (NDQ80_10255)	-	1950027..1950311 (-)	285	WP_003692093.1	GIY-YIG nuclease family protein	-
NDQ80_RS10245 (NDQ80_10260)	pilC	1951219..1954179 (-)	2961	WP_317629742.1	PilC family type IV pilus tip adhesin	Machinery gene
NDQ80_RS12115	pilC	1954179..1954307 (-)	129	WP_263071070.1	hypothetical protein	Machinery gene
NDQ80_RS10250 (NDQ80_10265)	-	1954994..1955257 (+)	264	WP_229433460.1	hypothetical protein	-
NDQ80_RS10255 (NDQ80_10270)	gnd	1955337..1956785 (+)	1449	WP_003688061.1	decarboxylating NADP(+)-dependent phosphogluconate dehydrogenase	-
NDQ80_RS10260 (NDQ80_10275)	waaA	1956848..1958119 (+)	1272	WP_010360974.1	lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase	-
NDQ80_RS10265 (NDQ80_10280)	-	1958160..1958609 (+)	450	WP_003688065.1	CopD family copper resistance protein	-

Sequence

Protein

• Length: 986 a.a.
• Molecular weight: 108217.88 Da
• Isoelectric Point: 9.7824

>NTDB_id=735835 NDQ80_RS10245 WP_317629742.1 1951219..1954179(-) (pilC) [Neisseria gonorrhoeae strain 10529]
MNTQNQPEVKSNVPYSIKDKDRKRVFDYTSQKSSLGRTNNFISFNNNDEVVARKNGTAVFGTATYLPPYGKVSGFDADAL
KERANAVDWIRTTRPGLAGYAYTDVICRDAGQCPQLVYETKFAFGQQGLQRNGNKLDIYEDKSRDNSPIYKLKDYPWLGV
SFNLGSENTVKNGRSSGRLISSFSENNDNQTIVSTTRDRPISLGDRQREHTAVAYYLNAKLHLLDKKRIKDIAQGKTVDL
GTLRPRVETTGRNWLSYWATWKIEDKGNITVRLGLPEVKAGRCINKPNPNPKSALSPALTAPALWFGPVQNGKVQMYSAS
VSTYPDSSSSRIFLQELKTQTEPGKPGRYSLKSLNDGEIKSRQPSFNGRQTIIRLDDGVHLIKLNGSKDEVAAFVNLNGN
NTGKNDTFGIVKEANVNLEADEWKKVLLPWTVRGPDNDNKFKSINQKPEKYSQRYRIRDNNGNRDLGDIVNSPIVAVGGY
LATSANDGMVHIFKKTGTDQRGYELKLSYIPGTMPRKDIESNDSTLAKELRAFAEKGYVGDRYGVDGGFVLRQVEDRVFM
FGAMGLGGRGAYALDLSKTNGNYPAAASLFDVKDGDKKGKNRVEVELGYTVGTPQIGKTQNGTYSAFLASGYAAKQIDDS
TNKTALYVYDLKDTLGTPIAKIEVKDGKGGLSSPTLVDKDLDGIVDIAYAGDRGGNMYRFDLSGDNPSKWTVRTIFQGTK
PITSAPAVSRLADKRVVIFGTGSDLSERDVVDKDQQYIYGIFDDDKGTVKVTVQNGTGGGLLEQVLKEENKTLFLNKGSD
GSGSKGWVVKLKEGQRVTVKPTVVLRTAFVTIRKYKDDGCGADTAILGINTADGGALTPRSARPIVPEANKDVAQYSGHK
TTSKGKSIPIGCMEKGGKTVCPNGYVYDKPVNVRYLDEKKTDDFPVTADGDAGGSGTFKEGKKPARNNRCFSGKGVRTLL
MNDLDSLDITGPMCGIKRLSWREVFF

Nucleotide

• Length: 2961 bp

>NTDB_id=735835 NDQ80_RS10245 WP_317629742.1 1951219..1954179(-) (pilC) [Neisseria gonorrhoeae strain 10529]
ATGAACACGCAAAACCAGCCCGAGGTAAAGTCGAATGTGCCATATTCAATAAAGGACAAAGACAGGAAGCGGGTATTTGA
CTATACGAGCCAGAAAAGCAGCTTAGGCAGGACAAACAATTTTATCTCATTCAACAATAACGATGAAGTTGTTGCTCGAA
AAAACGGTACTGCCGTTTTTGGCACAGCCACCTACCTGCCGCCCTACGGCAAGGTTTCCGGTTTTGATGCCGACGCTCTG
AAAGAGCGCGCCAATGCCGTTGATTGGATTCGTACCACCCGGCCCGGGCTGGCAGGCTACGCCTACACCGACGTCATATG
CAGAGACGCAGGGCAATGCCCCCAACTTGTCTATGAGACCAAATTTGCCTTCGGTCAACAAGGGTTGCAAAGAAATGGCA
ACAAGCTGGATATATACGAAGACAAAAGCCGCGACAATTCGCCCATTTACAAATTGAAGGATTATCCATGGTTGGGCGTA
TCTTTCAATTTGGGCAGCGAGAATACCGTCAAAAATGGCAGATCATCCGGCAGATTGATATCTTCTTTTAGTGAAAACAA
TGATAATCAAACCATCGTCTCTACGACACGAGACCGCCCTATTTCCCTTGGCGACCGGCAGCGCGAACATACCGCCGTGG
CCTATTATCTGAACGCCAAGCTGCACCTGCTGGACAAAAAAAGGATTAAAGATATCGCCCAAGGCAAAACAGTGGATTTG
GGCACCTTGAGACCGCGCGTCGAGACGACAGGACGAAACTGGCTAAGTTATTGGGCTACGTGGAAGATTGAAGATAAAGG
GAACATTACAGTCCGCCTCGGCCTGCCGGAAGTCAAAGCAGGCCGCTGCATCAACAAACCGAACCCCAATCCCAAATCAG
CCCTTTCGCCGGCACTGACCGCCCCCGCGCTGTGGTTCGGCCCTGTGCAAAATGGCAAGGTGCAGATGTATTCCGCTTCG
GTTTCTACCTACCCCGACAGTTCGAGCAGCCGCATCTTCCTCCAAGAGCTGAAAACTCAAACCGAACCCGGCAAACCCGG
CCGCTATTCCCTCAAATCTTTGAATGATGGTGAGATTAAAAGTCGACAGCCGAGTTTCAACGGGCGGCAAACAATCATCC
GATTGGATGACGGCGTACATTTGATCAAACTGAATGGAAGCAAGGATGAGGTCGCCGCTTTTGTCAATTTAAATGGAAAC
AACACCGGCAAAAACGACACTTTCGGCATTGTTAAGGAAGCGAACGTCAATCTTGAAGCTGACGAGTGGAAAAAAGTGCT
GCTGCCTTGGACGGTTCGGGGTCCCGATAATGACAATAAATTTAAATCAATTAACCAAAAACCAGAAAAATACAGCCAAA
GATACCGCATCCGCGACAACAACGGCAATCGCGATTTGGGCGACATCGTCAACAGCCCGATTGTCGCGGTCGGCGGGTAT
CTGGCAACTTCTGCCAACGACGGGATGGTGCATATCTTCAAAAAAACCGGCACAGACCAACGAGGCTACGAACTGAAGCT
CAGCTACATCCCGGGTACGATGCCGCGCAAGGATATTGAAAGCAACGATTCTACACTCGCCAAAGAGCTGCGCGCCTTTG
CCGAAAAAGGCTATGTGGGCGACCGCTACGGCGTGGACGGCGGCTTTGTCTTGCGTCAAGTTGAAGACCGCGTGTTTATG
TTCGGCGCGATGGGTTTGGGCGGCAGGGGCGCGTATGCCTTGGATTTAAGCAAAACCAACGGCAATTATCCAGCCGCCGC
TTCCCTGTTTGATGTCAAAGATGGCGATAAGAAAGGCAAAAATCGCGTGGAAGTGGAATTAGGCTACACCGTCGGCACGC
CGCAAATCGGCAAAACCCAAAACGGCACATACTCCGCCTTCCTCGCTTCCGGTTATGCGGCTAAACAAATTGACGACTCA
ACAAATAAAACCGCGCTGTATGTGTATGATTTGAAAGACACCTTAGGTACGCCGATTGCAAAAATCGAAGTGAAGGACGG
CAAGGGCGGGCTTTCGTCCCCCACGCTGGTGGATAAAGATTTGGACGGCATTGTCGATATCGCCTATGCCGGCGACCGGG
GCGGCAATATGTACCGCTTTGATTTGAGCGGCGACAATCCGTCCAAATGGACTGTACGCACTATTTTCCAAGGCACAAAA
CCGATTACCTCCGCGCCCGCCGTTTCCCGACTGGCAGACAAACGCGTGGTCATCTTCGGTACGGGCAGCGATTTGAGTGA
ACGGGATGTAGTCGATAAGGATCAACAATATATTTACGGTATCTTTGACGACGATAAGGGGACGGTTAAGGTAACGGTAC
AAAACGGCACGGGAGGCGGGCTGCTCGAGCAAGTGCTTAAAGAGGAAAATAAAACATTATTCCTGAACAAGGGATCCGAC
GGATCGGGCAGTAAGGGGTGGGTAGTGAAGCTGAAGGAAGGACAGCGCGTTACCGTCAAACCGACCGTGGTATTGCGTAC
CGCCTTCGTAACCATCCGCAAGTATAAAGACGACGGCTGCGGCGCGGATACCGCCATTTTGGGCATCAATACCGCCGACG
GCGGCGCATTGACTCCGAGAAGCGCGCGCCCGATTGTGCCGGAAGCCAATAAGGATGTCGCACAATATTCCGGCCATAAG
ACAACCTCCAAAGGCAAATCCATCCCTATAGGTTGTATGGAAAAAGGCGGTAAAACCGTCTGCCCGAACGGATATGTTTA
CGACAAGCCGGTTAATGTGCGTTATCTGGACGAAAAGAAAACAGACGATTTCCCCGTCACGGCAGACGGTGATGCAGGCG
GCAGCGGAACATTCAAAGAGGGTAAAAAACCCGCCCGCAATAACCGGTGCTTCTCCGGAAAAGGTGTGCGCACCCTGCTG
ATGAACGATTTGGACAGCTTGGATATTACCGGCCCGATGTGCGGTATCAAACGCTTAAGCTGGCGCGAAGTCTTCTTCTG
A

Domains

Predicted by InterproScan.

• Neisseria PilC beta-propeller domain (T4P_PilY1) (466-795)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilC	Neisseria meningitidis A1493	71.726	100	0.733