Detailed information    

insolico Bioinformatically predicted

Overview

Name   dsbA1   Type   Machinery gene
Locus tag   OCL41_RS07755 Genome accession   NZ_CP106815
Coordinates   1486415..1487059 (+) Length   214 a.a.
NCBI ID   WP_003698856.1    Uniprot ID   A0AA44U6I4
Organism   Neisseria gonorrhoeae strain 10562     
Function   DNA binding and uptake; interact with PilQ (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1481415..1492059
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OCL41_RS07735 (OCL41_07735) putP 1481599..1483125 (-) 1527 WP_003689473.1 sodium/proline symporter PutP -
  OCL41_RS07740 (OCL41_07740) - 1483613..1483933 (+) 321 WP_002216505.1 accessory factor UbiK family protein -
  OCL41_RS07745 (OCL41_07745) comM 1483947..1485443 (+) 1497 WP_003693541.1 YifB family Mg chelatase-like AAA ATPase Machinery gene
  OCL41_RS07750 (OCL41_07750) ftsN 1485549..1486412 (+) 864 WP_010360712.1 cell division protein FtsN -
  OCL41_RS07755 (OCL41_07755) dsbA1 1486415..1487059 (+) 645 WP_003698856.1 thiol:disulfide interchange protein DsbA/DsbL Machinery gene
  OCL41_RS07760 (OCL41_07760) - 1487092..1487913 (+) 822 WP_003689465.1 undecaprenyl-diphosphate phosphatase -
  OCL41_RS07775 (OCL41_07775) - 1488354..1489601 (-) 1248 WP_010951292.1 class I SAM-dependent methyltransferase -
  OCL41_RS07780 (OCL41_07780) mraZ 1489880..1490335 (+) 456 WP_003689463.1 division/cell wall cluster transcriptional repressor MraZ -
  OCL41_RS07785 (OCL41_07785) rsmH 1490332..1491288 (+) 957 WP_003689462.1 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH -
  OCL41_RS07790 (OCL41_07790) ftsL 1491315..1491578 (+) 264 WP_003689461.1 cell division protein FtsL -

Sequence

Protein


Download         Length: 214 a.a.        Molecular weight: 23973.05 Da        Isoelectric Point: 9.9225

>NTDB_id=735681 OCL41_RS07755 WP_003698856.1 1486415..1487059(+) (dsbA1) [Neisseria gonorrhoeae strain 10562]
MKFKHLLPLLLSAVLSAQAYALTEGEDYLVLDKPIPQEQPGKIEVLEFFGYFCVHCHHFDPLLLKLGKALPSDTYLRTEH
VVWRPEMLGLARMAAAVKLSGLKYQANSAVFKAVYEQKIRLENRAVAGKWALSQKGFDGKKLMRAYDSPEAAAVALKMQK
LTEQYGIDGTPTVIVGGKYRVIFNNGFDGGVHTIKELVAKVREERKRQTPAVQK

Nucleotide


Download         Length: 645 bp        

>NTDB_id=735681 OCL41_RS07755 WP_003698856.1 1486415..1487059(+) (dsbA1) [Neisseria gonorrhoeae strain 10562]
ATGAAGTTTAAACATCTGTTGCCGCTGCTGCTGTCGGCAGTGTTGTCCGCGCAGGCATATGCCCTGACGGAAGGGGAAGA
CTATCTTGTGTTGGATAAACCCATTCCTCAAGAACAGCCGGGAAAAATTGAGGTTTTGGAATTTTTCGGCTATTTTTGCG
TACATTGCCATCATTTCGATCCTTTGTTATTGAAACTGGGCAAGGCATTGCCGTCTGATACTTATCTGCGGACGGAGCAC
GTGGTCTGGCGGCCTGAAATGCTCGGTCTGGCAAGAATGGCTGCTGCGGTCAAGCTGTCGGGTTTGAAATATCAGGCAAA
CTCTGCTGTGTTTAAAGCAGTTTACGAACAAAAAATCCGTTTGGAAAACAGGGCTGTTGCCGGAAAATGGGCTTTATCTC
AAAAAGGTTTTGACGGCAAAAAACTGATGCGCGCCTATGATTCCCCCGAAGCTGCCGCCGTCGCATTAAAAATGCAGAAA
CTGACGGAACAATACGGTATTGACGGCACGCCGACCGTTATTGTCGGCGGAAAATACCGCGTTATCTTCAATAATGGCTT
TGATGGCGGCGTTCATACGATTAAAGAATTGGTTGCCAAAGTCAGGGAAGAACGCAAGCGTCAGACCCCTGCTGTACAGA
AATAG

Domains

Predicted by InterproScan.

DSBA-like thioredoxin domain (DSBA)

(86-182)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dsbA1 Neisseria meningitidis MC58

57.754

87.383

0.505
  dsbA2 Neisseria meningitidis MC58

53.226

86.916

0.463