Detailed information NTG0735507

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: P6F23_RS10715
• Genome accession: NZ_CP120953
• Coordinates: 2113370..2114479 (+)
• Length: 369 a.a.
• NCBI ID: WP_000264863.1
• Uniprot ID: Q8DWQ8
• Organism: Streptococcus agalactiae strain GBSIR0001
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2108370..2119479

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
P6F23_RS10690 (P6F23_10690)	-	2108742..2109581 (-)	840	WP_000181757.1	energy-coupling factor ABC transporter ATP-binding protein	-
P6F23_RS10695 (P6F23_10695)	pgsA	2109581..2110123 (-)	543	WP_000976003.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
P6F23_RS10700 (P6F23_10700)	-	2110246..2111529 (-)	1284	WP_000217755.1	pitrilysin family protein	-
P6F23_RS10705 (P6F23_10705)	-	2111531..2112775 (-)	1245	WP_000706188.1	pitrilysin family protein	-
P6F23_RS10710 (P6F23_10710)	yaaA	2113014..2113367 (+)	354	WP_000384871.1	S4 domain-containing protein YaaA	-
P6F23_RS10715 (P6F23_10715)	recF	2113370..2114479 (+)	1110	WP_000264863.1	DNA replication/repair protein RecF	Machinery gene
P6F23_RS10720 (P6F23_10720)	-	2114491..2115357 (-)	867	WP_000398683.1	GRP family sugar transporter	-
P6F23_RS10725 (P6F23_10725)	-	2115413..2116075 (-)	663	WP_001865840.1	helix-turn-helix transcriptional regulator	-
P6F23_RS10730 (P6F23_10730)	guaB	2116150..2117631 (-)	1482	WP_000073440.1	IMP dehydrogenase	-
P6F23_RS10735 (P6F23_10735)	-	2117788..2118273 (-)	486	WP_001034427.1	arginine repressor	-
P6F23_RS10740 (P6F23_10740)	-	2118283..2118963 (-)	681	WP_000628851.1	Crp/Fnr family transcriptional regulator	-

Sequence

Protein

• Length: 369 a.a.
• Molecular weight: 42526.35 Da
• Isoelectric Point: 7.3132

>NTDB_id=735507 P6F23_RS10715 WP_000264863.1 2113370..2114479(+) (recF) [Streptococcus agalactiae strain GBSIR0001]
MWIKNISLKHYRNYEEAQVDFSPNLNIFIGRNAQGKTNFLEAIYFLALTRSHRTRSDKELVHFKHHDVQITGEVIRKSGH
LNLDIQLSEKGRITKVNHLKQAKLSDYIGAMTVVLFAPEDLQLVKGAPSLRRKFLDIDIGQIKPTYLAELSNYNHVLKQR
NTYLKTTNNVDKTFLTVLDEQLADYGSRVIEHRFDFIQALNDEADKHHYIISTELEHLSIHYKSSIEFTDKSSIREHFLN
QLSKSHSRDIFKKNTSIGPHRDDITFFINDINATFASQGQQRSLILSLKLAEIELIKTVTNDYPILLLDDVMSELDNHRQ
LKLLEGIKENVQTFITTTSLEHLSALPDQLKIFNVSDGTISINEKKATD

Nucleotide

• Length: 1110 bp

>NTDB_id=735507 P6F23_RS10715 WP_000264863.1 2113370..2114479(+) (recF) [Streptococcus agalactiae strain GBSIR0001]
ATGTGGATAAAAAATATTTCTTTAAAACATTATCGTAATTATGAAGAAGCACAAGTAGATTTTTCACCCAACCTCAATAT
TTTCATTGGCCGCAATGCTCAAGGAAAGACAAATTTTTTAGAAGCAATCTACTTCTTGGCTTTGACTCGAAGTCACCGTA
CCCGTTCTGATAAAGAACTTGTACATTTTAAACACCATGATGTACAAATTACAGGTGAGGTAATCCGCAAAAGTGGCCAT
CTTAACTTAGATATTCAATTATCTGAAAAAGGAAGAATCACTAAAGTTAACCATCTTAAACAGGCAAAATTATCTGATTA
TATTGGGGCTATGACTGTCGTACTTTTTGCCCCTGAAGATCTTCAATTAGTTAAAGGTGCACCTAGTCTAAGACGAAAAT
TTTTAGATATAGATATTGGACAAATTAAGCCAACGTACTTAGCTGAACTTTCAAATTACAATCATGTATTAAAACAAAGA
AACACTTATCTAAAAACTACTAATAACGTCGACAAAACTTTTTTAACAGTCCTTGATGAACAATTAGCTGATTATGGAAG
TCGTGTCATTGAACACCGTTTTGATTTTATCCAAGCCCTAAATGATGAAGCGGACAAACATCACTACATTATCAGTACTG
AGTTAGAACATTTATCTATTCACTACAAATCGTCAATAGAGTTTACAGATAAGTCAAGTATTAGGGAACATTTTTTAAAC
CAATTATCTAAAAGCCACTCAAGAGACATCTTTAAGAAAAACACAAGCATCGGACCTCATCGTGATGATATTACTTTCTT
TATTAATGATATCAATGCTACTTTTGCTAGCCAAGGGCAACAAAGAAGCCTTATTTTATCATTGAAATTAGCAGAAATTG
AGCTAATAAAAACCGTTACCAACGATTATCCGATTCTCTTACTTGACGACGTCATGAGTGAACTTGACAACCATCGTCAA
CTAAAACTCTTAGAGGGAATCAAAGAGAATGTTCAAACATTTATTACTACAACAAGTTTAGAACATTTAAGTGCTTTACC
TGATCAACTCAAAATCTTTAACGTTAGTGATGGTACTATTAGTATTAATGAAAAAAAAGCAACAGATTAA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-359)

3D structure

• AlphaFold DB: Q8DWQ8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	63.085	98.374	0.621
recF	Bacillus subtilis subsp. subtilis str. 168	44.565	99.729	0.444