Detailed information NTG0735349

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: OCL43_RS09440
• Genome accession: NZ_CP106801
• Coordinates: 1797499..1798752 (-)
• Length: 417 a.a.
• NCBI ID: WP_003687004.1
• Uniprot ID: A0AB74EGQ8
• Organism: Neisseria gonorrhoeae strain 10744
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1792499..1803752

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OCL43_RS09415 (OCL43_09415)	lpxC	1793106..1794029 (+)	924	WP_003687007.1	UDP-3-O-acyl-N-acetylglucosamine deacetylase	-
OCL43_RS09420 (OCL43_09420)	-	1794157..1794549 (+)	393	Protein_1821	pilin	-
OCL43_RS09425 (OCL43_09425)	-	1794667..1794741 (+)	75	Protein_1822	pilin	-
OCL43_RS09430 (OCL43_09430)	pilE	1795367..1795864 (+)	498	WP_263057282.1	pilin	Machinery gene
OCL43_RS09435 (OCL43_09435)	-	1796512..1797203 (+)	692	Protein_1824	opacity family porin	-
OCL43_RS09440 (OCL43_09440)	pilA	1797499..1798752 (-)	1254	WP_003687004.1	signal recognition particle-docking protein FtsY	Machinery gene
OCL43_RS09445 (OCL43_09445)	msrAB	1798898..1800466 (+)	1569	WP_003696503.1	bifunctional peptide-methionine (S)-S-oxide reductase MsrA/peptide-methionine (R)-S-oxide reductase MsrB	-
OCL43_RS09450 (OCL43_09450)	-	1800550..1801032 (-)	483	WP_003694396.1	CinA family protein	-
OCL43_RS09455 (OCL43_09455)	-	1801059..1801907 (-)	849	WP_003687000.1	mechanosensitive ion channel family protein	-
OCL43_RS09460 (OCL43_09460)	-	1802001..1803002 (-)	1002	WP_106337002.1	thiamine ABC transporter substrate-binding protein	-

Sequence

Protein

• Length: 417 a.a.
• Molecular weight: 44389.74 Da
• Isoelectric Point: 4.8123

>NTDB_id=735349 OCL43_RS09440 WP_003687004.1 1797499..1798752(-) (pilA) [Neisseria gonorrhoeae strain 10744]
MFSFFRRKKKQETPALEEAQVQETAAKVESEVAQIVGNIKEDVESLAESVKGRAESAVETVSGAVEQVKETVAEMPSEAG
EAAERVESAKEAVAETVGEAVGQVQEAVATTEEHKLGWAARLKQGLAKSRDKMAKSLAGVFGGGQIGEDLYEELETVLIT
GDMGMEATEYLMKDVRDRVSLKGLKDGNELRGALKEALYDLIKPLEKPLVLPETKEPFVIMLAGINGAGKTTSIGKLAKY
FQAQGKSVLLAAGDTFRAAAREQLQAWGGRNNVTVISQTTGDSAAVCFDAVQAAKARGIDIVLADTAGRLPTQLHLMEEI
KKVKRVLQKAIPGAPHEIIVVLDANIGQNAVNQVKAFDDALGLTGLIVTKLDGTAKGGILAALASDRPVPVRYIGVGEGI
DDLRPFDARAFVDALLD

Nucleotide

• Length: 1254 bp

>NTDB_id=735349 OCL43_RS09440 WP_003687004.1 1797499..1798752(-) (pilA) [Neisseria gonorrhoeae strain 10744]
ATGTTCAGCTTCTTCCGTCGCAAGAAAAAACAGGAAACGCCGGCTCTCGAGGAGGCCCAAGTTCAGGAAACCGCAGCAAA
AGTAGAATCTGAAGTTGCTCAAATAGTTGGAAATATTAAAGAAGATGTCGAATCTTTAGCAGAAAGCGTCAAAGGGCGGG
CCGAATCTGCCGTTGAAACCGTCAGCGGTGCGGTTGAACAGGTAAAGGAAACCGTTGCCGAGATGCCGTCTGAAGCAGGG
GAAGCGGCGGAACGCGTTGAATCCGCAAAAGAAGCTGTTGCCGAAACCGTCGGCGAGGCTGTCGGGCAAGTTCAAGAAGC
CGTTGCGACAACTGAAGAACACAAGCTCGGTTGGGCTGCGCGTTTGAAACAAGGCTTGGCCAAATCACGCGACAAAATGG
CGAAATCGCTGGCCGGCGTGTTCGGCGGCGGACAAATCGGCGAGGATTTGTACGAAGAGCTGGAAACCGTGCTGATTACC
GGCGATATGGGCATGGAAGCCACCGAATACCTGATGAAAGACGTGCGCGACCGCGTCAGCCTCAAAGGGCTGAAAGACGG
CAACGAATTGCGCGGCGCGTTGAAAGAAGCCTTGTACGACCTGATTAAGCCGTTGGAAAAACCGCTGGTCTTGCCCGAAA
CTAAAGAGCCTTTCGTGATTATGCTTGCCGGTATCAACGGCGCGGGCAAAACCACGTCTATCGGCAAACTCGCCAAATAT
TTCCAAGCGCAGGGCAAATCCGTATTGCTGGCGGCGGGCGATACTTTCCGCGCCGCCGCGCGCGAGCAGCTTCAGGCTTG
GGGCGGGCGCAACAATGTAACCGTGATTTCACAAACCACGGGCGATTCCGCCGCCGTGTGCTTCGATGCCGTCCAAGCCG
CGAAAGCGCGCGGGATCGACATCGTGCTTGCCGACACCGCCGGCCGCCTGCCCACGCAGCTTCATTTGATGGAAGAAATC
AAAAAAGTGAAGCGCGTGCTGCAAAAAGCCATTCCCGGCGCGCCGCACGAAATTATCGTCGTACTCGATGCCAATATCGG
GCAAAACGCCGTCAACCAAGTCAAAGCCTTTGACGACGCATTGGGGCTGACGGGGCTTATCGTTACCAAACTCGACGGCA
CGGCAAAAGGCGGCATCCTCGCCGCGCTTGCTTCCGACCGCCCCGTCCCCGTCCGCTACATCGGCGTGGGCGAAGGCATA
GACGACCTGCGCCCGTTTGACGCGCGCGCGTTTGTGGACGCACTGCTGGATTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (217-416)

• SRP54-type protein, helical bundle domain (SRP54_N) (132-198)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	99.76	100	0.998