Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   N7220_RS11855 Genome accession   NZ_CP106736
Coordinates   2573609..2574001 (-) Length   130 a.a.
NCBI ID   WP_283147728.1    Uniprot ID   -
Organism   Silvimonas soli strain 17-6     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 2568609..2579001
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  N7220_RS11840 - 2570243..2572414 (-) 2172 WP_283147725.1 methyl-accepting chemotaxis protein -
  N7220_RS11845 - 2572579..2573091 (-) 513 WP_283147726.1 chemotaxis protein CheW -
  N7220_RS11850 - 2573161..2573517 (-) 357 WP_390901582.1 response regulator -
  N7220_RS11855 pilG 2573609..2574001 (-) 393 WP_283147728.1 PleD family two-component system response regulator Regulator
  N7220_RS11860 - 2574388..2574954 (+) 567 WP_390901493.1 YidB family protein -
  N7220_RS11865 - 2574996..2576321 (-) 1326 WP_283147730.1 NAD(P)/FAD-dependent oxidoreductase -
  N7220_RS11870 - 2576318..2577325 (-) 1008 WP_283147731.1 lysylphosphatidylglycerol synthase transmembrane domain-containing protein -
  N7220_RS11875 - 2577336..2578322 (-) 987 WP_283147732.1 glycosyltransferase family 2 protein -

Sequence

Protein


Download         Length: 130 a.a.        Molecular weight: 14304.50 Da        Isoelectric Point: 7.1346

>NTDB_id=734210 N7220_RS11855 WP_283147728.1 2573609..2574001(-) (pilG) [Silvimonas soli strain 17-6]
MPSLTGVKVMVIDDSNTIRRSAEIFLGQAGCEVILAEDGFDALSKVSDHNPDVIFVDVMMPRLDGYQTCSLIKKNPRFKA
TPVIMLSSKDGLFDRARGRMVGSDEYLTKPFTKDSLLTAVDQHAKARQPG

Nucleotide


Download         Length: 393 bp        

>NTDB_id=734210 N7220_RS11855 WP_283147728.1 2573609..2574001(-) (pilG) [Silvimonas soli strain 17-6]
ATGCCCAGTCTTACCGGGGTCAAAGTGATGGTGATTGACGACAGCAACACCATCCGTCGTAGTGCAGAAATTTTTCTCGG
GCAGGCCGGTTGCGAAGTCATCCTGGCAGAAGACGGTTTTGACGCGCTGTCCAAAGTGAGCGACCACAACCCCGACGTGA
TTTTTGTGGATGTGATGATGCCGCGGCTGGATGGCTATCAAACCTGTTCGCTGATCAAGAAAAACCCGAGATTCAAAGCC
ACGCCGGTGATCATGCTGTCATCCAAGGATGGCCTGTTTGATCGTGCCCGCGGGCGCATGGTGGGTTCGGATGAATATCT
GACCAAACCATTTACCAAAGACAGTTTACTGACTGCCGTCGACCAGCACGCCAAGGCGCGGCAGCCAGGTTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(9-120)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

65.323

95.385

0.623
  vicR Streptococcus mutans UA159

39.831

90.769

0.362