Detailed information    

insolico Bioinformatically predicted

Overview

Name   yaaT   Type   Regulator
Locus tag   P5657_RS02960 Genome accession   NZ_CP120621
Coordinates   566242..567069 (-) Length   275 a.a.
NCBI ID   WP_003226767.1    Uniprot ID   A0ABU0VCW3
Organism   Bacillus subtilis strain DSM 13019     
Function   accelerate the production of Spo0A~P (predicted from homology)   
Competence regulation

Genomic Context

Location: 561242..572069
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P5657_RS02935 (P5657_02935) abrB 563588..563878 (+) 291 WP_003226760.1 transition state genes transcriptional regulator AbrB Regulator
  P5657_RS02940 (P5657_02940) rsmI 563927..564805 (-) 879 WP_019712967.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
  P5657_RS02945 (P5657_02945) yazA 564780..565079 (-) 300 WP_106611059.1 GIY-YIG nuclease family protein -
  P5657_RS02950 (P5657_02950) trmNF 565066..565809 (-) 744 WP_077671692.1 tRNA1(Val) (adenine(37)-N6)-methyltransferase -
  P5657_RS02955 (P5657_02955) yabA 565868..566227 (-) 360 WP_003218308.1 replication initiation-control protein YabA -
  P5657_RS02960 (P5657_02960) yaaT 566242..567069 (-) 828 WP_003226767.1 competence/sporulation regulator complex protein RicT Regulator
  P5657_RS02965 (P5657_02965) holB 567072..568061 (-) 990 WP_106611057.1 DNA polymerase III subunit delta' -
  P5657_RS02970 (P5657_02970) yaaR 568073..568513 (-) 441 WP_009966249.1 YaaR family protein -
  P5657_RS02975 (P5657_02975) darA 568526..568855 (-) 330 WP_003242755.1 cyclic di-AMP receptor DarA -
  P5657_RS02980 (P5657_02980) tmk 568929..569567 (-) 639 WP_015253015.1 dTMP kinase -
  P5657_RS02985 (P5657_02985) efpO 569564..571006 (-) 1443 WP_072174174.1 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme -

Sequence

Protein


Download         Length: 275 a.a.        Molecular weight: 31233.09 Da        Isoelectric Point: 4.7700

>NTDB_id=733232 P5657_RS02960 WP_003226767.1 566242..567069(-) (yaaT) [Bacillus subtilis strain DSM 13019]
MYNVIGVRFKKAGKIYYFDPNGFHIEHDSCVIVETVRGVEYGQVVIANKQVDEHDVVLPLRKVIRVADERDLLIVEENKQ
EALSAFDICQKKVIEHGLDMKLVDVEFTFDRNKVIFYFTADGRVDFRELVKDLASIFKTRIELRQIGVRDEAKMLGGIGP
CGRMLCCSTFLGDFEPVSIKMAKDQNLSLNPTKISGLCGRLMCCLKYENDEYETAKEQLPDIGEMITTANGPAKVVGLNI
LERVLQVELINREKVIEYTWEELLEEGVVSAQTTD

Nucleotide


Download         Length: 828 bp        

>NTDB_id=733232 P5657_RS02960 WP_003226767.1 566242..567069(-) (yaaT) [Bacillus subtilis strain DSM 13019]
TTGTACAATGTAATTGGTGTCCGCTTTAAGAAAGCGGGTAAAATATATTATTTTGATCCGAATGGATTTCATATAGAACA
TGACAGCTGCGTAATTGTAGAAACTGTCAGAGGCGTTGAGTACGGCCAGGTCGTAATTGCAAATAAACAGGTGGATGAGC
ATGATGTGGTGCTTCCCCTTCGAAAAGTGATACGTGTGGCTGACGAGCGCGATCTTCTCATTGTAGAAGAAAATAAACAG
GAAGCACTATCAGCATTTGATATCTGCCAAAAGAAAGTGATTGAGCATGGCTTGGATATGAAGCTGGTCGATGTTGAATT
CACGTTTGATCGCAATAAAGTCATTTTTTACTTCACTGCTGACGGCCGAGTCGACTTTAGAGAGCTTGTAAAGGATTTGG
CTTCTATCTTTAAGACAAGAATTGAGCTGCGCCAAATCGGAGTGAGGGATGAGGCAAAAATGCTCGGAGGAATCGGTCCT
TGCGGAAGAATGCTTTGCTGTTCAACGTTTCTTGGAGATTTTGAACCCGTTTCCATTAAAATGGCCAAGGATCAGAACTT
GTCTTTAAATCCTACGAAGATTTCGGGTCTTTGCGGACGATTGATGTGCTGTCTAAAATATGAGAACGATGAGTATGAGA
CGGCAAAAGAACAGCTTCCGGATATAGGAGAAATGATAACGACAGCAAACGGTCCCGCGAAGGTCGTCGGACTAAATATT
CTGGAACGGGTGCTTCAGGTGGAACTGATAAACCGTGAAAAAGTGATAGAATATACTTGGGAAGAGCTCTTGGAAGAGGG
CGTCGTATCCGCACAAACCACAGATTAA

Domains

Predicted by InterProScan.

PSP1 C-terminal conserved region (PSP1)

(62-146)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  yaaT Bacillus subtilis subsp. subtilis str. 168

99.636

100

0.996