Detailed information    

insolico Bioinformatically predicted

Overview

Name   comA   Type   Regulator
Locus tag   N8A75_RS17140 Genome accession   NZ_CP104878
Coordinates   3136505..3137149 (-) Length   214 a.a.
NCBI ID   WP_003220716.1    Uniprot ID   -
Organism   Bacillus subtilis strain 4ZT     
Function   promoting transcription of comS (predicted from homology)   
Competence regulation

Genomic Context

Location: 3131505..3142149
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  N8A75_RS17105 (N8A75_17105) mrpB 3132695..3133126 (+) 432 WP_038429537.1 Na(+)/H(+) antiporter subunit B -
  N8A75_RS17110 (N8A75_17110) mrpC 3133126..3133467 (+) 342 WP_003220730.1 Na(+)/H(+) antiporter subunit C -
  N8A75_RS17115 (N8A75_17115) mrpD 3133460..3134941 (+) 1482 WP_046381299.1 Na+/H+ antiporter subunit D -
  N8A75_RS17120 (N8A75_17120) mrpE 3134947..3135423 (+) 477 WP_003228815.1 Na+/H+ antiporter subunit E -
  N8A75_RS17125 (N8A75_17125) mrpF 3135423..3135707 (+) 285 WP_003228814.1 Na(+)/H(+) antiporter subunit F1 -
  N8A75_RS17130 (N8A75_17130) mnhG 3135691..3136065 (+) 375 WP_003244302.1 monovalent cation/H(+) antiporter subunit G -
  N8A75_RS17135 (N8A75_17135) yuxO 3136106..3136486 (-) 381 WP_014477831.1 hotdog fold thioesterase -
  N8A75_RS17140 (N8A75_17140) comA 3136505..3137149 (-) 645 WP_003220716.1 two-component system response regulator ComA Regulator
  N8A75_RS17145 (N8A75_17145) comP 3137230..3139527 (-) 2298 WP_087614687.1 histidine kinase Regulator
  N8A75_RS17150 (N8A75_17150) comX 3139535..3139696 (-) 162 WP_003241045.1 competence pheromone ComX -
  N8A75_RS17155 (N8A75_17155) - 3139711..3140571 (-) 861 WP_046160795.1 polyprenyl synthetase family protein -
  N8A75_RS17160 (N8A75_17160) degQ 3140756..3140896 (-) 141 WP_003220708.1 degradation enzyme regulation protein DegQ Regulator
  N8A75_RS17165 (N8A75_17165) - 3141118..3141243 (+) 126 WP_120028613.1 hypothetical protein -
  N8A75_RS17170 (N8A75_17170) - 3141358..3141726 (+) 369 WP_017695529.1 hypothetical protein -

Sequence

Protein


Download         Length: 214 a.a.        Molecular weight: 24128.51 Da        Isoelectric Point: 4.6857

>NTDB_id=733144 N8A75_RS17140 WP_003220716.1 3136505..3137149(-) (comA) [Bacillus subtilis strain 4ZT]
MKKILVIDDHPAVMEGTKTILETDSNLSVDCLSPEPSEQFIKQHDFSSYDLILMDLNLGGEVNGMELSKQILQENPHCKI
IVYTGYEVEDYFEEAIRAGLHGAISKTESKEKITQYIYHVLNGEILVDFAYFKQLMTQQKTKPAPSSQKEQDVLTPRECL
ILQEVEKGFTNQEIADALHLSKRSIEYSLTSIFNKLNVGSRTEAVLIAKSDGVL

Nucleotide


Download         Length: 645 bp        

>NTDB_id=733144 N8A75_RS17140 WP_003220716.1 3136505..3137149(-) (comA) [Bacillus subtilis strain 4ZT]
ATGAAAAAGATACTAGTGATTGATGACCATCCGGCTGTCATGGAAGGCACCAAGACAATTTTGGAAACGGATTCGAATTT
GTCTGTTGATTGTCTCAGTCCTGAACCGAGCGAACAGTTTATCAAGCAGCATGATTTCTCGTCATATGATCTCATTTTAA
TGGATCTGAATTTAGGCGGCGAGGTCAATGGGATGGAGCTTTCTAAACAGATTTTACAAGAGAATCCTCATTGTAAAATT
ATCGTGTATACCGGTTATGAGGTCGAGGATTATTTCGAGGAAGCGATTCGTGCGGGTCTGCACGGTGCCATCAGCAAAAC
GGAATCTAAAGAAAAGATCACCCAATACATATACCACGTACTCAACGGAGAAATTTTAGTCGATTTTGCTTACTTTAAAC
AGCTGATGACTCAGCAAAAAACAAAGCCGGCTCCTTCCTCTCAAAAAGAACAAGATGTGCTCACACCTAGAGAATGCCTG
ATTCTTCAAGAAGTTGAAAAGGGATTTACAAACCAAGAAATCGCAGATGCCCTTCATTTAAGCAAGCGGTCCATTGAATA
CAGCTTGACATCGATTTTCAATAAGCTGAATGTCGGTTCACGGACGGAAGCGGTTTTGATTGCGAAATCAGACGGTGTAC
TTTAA

Domains

Predicted by InterproScan.

Bacterial regulatory proteins, luxR family (GerE)

(152-208)

Response regulator receiver domain (Response_reg)

(4-117)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comA Bacillus subtilis subsp. subtilis str. 168

100

100

1