Detailed information    

insolico Bioinformatically predicted

Overview

Name   letA   Type   Regulator
Locus tag   P5661_RS20400 Genome accession   NZ_CP120600
Coordinates   3850643..3851017 (-) Length   124 a.a.
NCBI ID   WP_003227621.1    Uniprot ID   A0A9W5LLN9
Organism   Bacillus subtilis strain PRO112     
Function   regulate competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 3845643..3856017
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  P5661_RS20375 (P5661_20375) - 3845807..3845968 (-) 162 WP_003227632.1 hypothetical protein -
  P5661_RS20380 (P5661_20380) glpX 3846183..3847148 (-) 966 WP_014481197.1 class II fructose-bisphosphatase -
  P5661_RS20385 (P5661_20385) murAB 3847179..3848468 (-) 1290 WP_003227628.1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase -
  P5661_RS20390 (P5661_20390) fsa 3848847..3849485 (-) 639 WP_003227626.1 fructose-6-phosphate aldolase -
  P5661_RS20395 (P5661_20395) fbaA 3849605..3850462 (-) 858 WP_003243339.1 class II fructose-bisphosphate aldolase -
  P5661_RS20400 (P5661_20400) letA 3850643..3851017 (-) 375 WP_003227621.1 sporulation initiation phosphotransferase Spo0F Regulator
  P5661_RS20405 (P5661_20405) ywjG 3851183..3851704 (+) 522 WP_014481199.1 DUF2529 domain-containing protein -
  P5661_RS20410 (P5661_20410) pyrG 3851786..3853393 (-) 1608 WP_021480821.1 CTP synthase (glutamine hydrolyzing) -
  P5661_RS20415 (P5661_20415) rpoE 3853635..3854156 (-) 522 WP_003227609.1 DNA-directed RNA polymerase subunit delta -
  P5661_RS20420 (P5661_20420) acdA 3854339..3855478 (-) 1140 WP_277709107.1 acyl-CoA dehydrogenase AcdA -

Sequence

Protein


Download         Length: 124 a.a.        Molecular weight: 14227.68 Da        Isoelectric Point: 4.6400

>NTDB_id=733042 P5661_RS20400 WP_003227621.1 3850643..3851017(-) (letA) [Bacillus subtilis strain PRO112]
MMNEKILIVDDQYGIRILLNEVFNKEGYQTFQAANGLQALDIVTKERPDLVLLDMKIPGMDGIEILKRMKVIDENIRVII
MTAYGELDMIQESKELGALTHFAKPFDIDEIRDAVKKYLPLKSN

Nucleotide


Download         Length: 375 bp        

>NTDB_id=733042 P5661_RS20400 WP_003227621.1 3850643..3851017(-) (letA) [Bacillus subtilis strain PRO112]
ATGATGAATGAAAAAATTTTAATCGTTGATGATCAATACGGCATTCGTATTTTGCTAAATGAAGTGTTCAATAAAGAAGG
CTACCAGACGTTTCAGGCTGCGAACGGCCTGCAGGCGCTTGACATTGTGACAAAAGAACGGCCCGACCTTGTGCTTTTGG
ACATGAAAATTCCCGGCATGGACGGAATCGAAATCTTAAAACGGATGAAGGTCATTGACGAAAACATCCGGGTCATTATC
ATGACGGCATACGGAGAGCTCGACATGATCCAGGAATCGAAGGAATTGGGCGCTCTGACGCACTTTGCCAAGCCGTTTGA
CATCGACGAAATCAGAGACGCCGTCAAAAAATATCTGCCCCTGAAGTCTAACTGA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(6-116)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A9W5LLN9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  letA Legionella pneumophila str. Paris

38.462

94.355

0.363
  letA Legionella pneumophila strain ERS1305867

38.462

94.355

0.363