Detailed information NTG0732736

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: N6G78_RS18815
• Genome accession: NZ_CP104855
• Coordinates: 3654038..3655183 (+)
• Length: 381 a.a.
• NCBI ID: WP_015384935.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain TY-1
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3649038..3660183

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
N6G78_RS18795 (N6G78_18795)	albF	3649056..3650336 (+)	1281	WP_015483836.1	M16 family metallopeptidase	-
N6G78_RS18800 (N6G78_18800)	albG	3650333..3651034 (+)	702	WP_015384931.1	antilisterial bacteriocin subtilosin biosynthesis protein AlbG	-
N6G78_RS18805 (N6G78_18805)	ywhL	3651040..3652413 (-)	1374	WP_015483837.1	YncE family protein	-
N6G78_RS18810 (N6G78_18810)	ywhK	3652453..3653808 (-)	1356	WP_015384933.1	YncE family protein	-
N6G78_RS20735	-	3653805..3654035 (-)	231	WP_015483838.1	hypothetical protein	-
N6G78_RS18815 (N6G78_18815)	rapF	3654038..3655183 (+)	1146	WP_015384935.1	response regulator aspartate phosphatase RapF	Regulator
N6G78_RS18820 (N6G78_18820)	phrF	3655167..3655286 (+)	120	WP_009968329.1	phosphatase RapF inhibitor PhrF	Regulator
N6G78_RS18825 (N6G78_18825)	-	3655514..3655990 (+)	477	WP_015384936.1	hypothetical protein	-
N6G78_RS18830 (N6G78_18830)	-	3656250..3656936 (+)	687	WP_236822444.1	hypothetical protein	-
N6G78_RS18835 (N6G78_18835)	-	3658412..3659059 (+)	648	WP_015384940.1	ABC transporter ATP-binding protein	-
N6G78_RS18840 (N6G78_18840)	-	3659052..3659615 (+)	564	WP_015483840.1	hypothetical protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45617.08 Da
• Isoelectric Point: 5.1503

>NTDB_id=732736 N6G78_RS18815 WP_015384935.1 3654038..3655183(+) (rapF) [Bacillus subtilis strain TY-1]
MTGVISSSSIGEKINEWYMYIRRFSIPDAEYLRREIKQELDHMEEDQDLHLYYSLMEFRHNLMLEYLEPLEKMRIEEQPR
LSDLLLEIDKKQARLTGLLEYYFNFFRGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFS
MDYARQAYEIYKENEAYNIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYED
AITYFKRAIAVFEESNILPSLPQAYFLITQIHYKLGKMDKAHEYHSKGMAYSQKAGDVIYLSEFEFLKSLYLSGPDEEAI
QGFFDFLESKMLYADLEDFAIDVAKYYHERKNFQKASAYFLKVEQVRQLIQGGVSLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=732736 N6G78_RS18815 WP_015384935.1 3654038..3655183(+) (rapF) [Bacillus subtilis strain TY-1]
GTGACAGGTGTCATATCTTCTTCTTCCATCGGAGAAAAGATTAACGAATGGTATATGTACATACGCCGATTTAGCATACC
CGATGCAGAATATTTGCGACGAGAAATCAAGCAAGAGCTGGATCACATGGAAGAAGATCAAGACCTTCATTTGTACTATT
CACTAATGGAGTTTCGGCACAACCTGATGCTTGAGTACCTTGAACCGTTAGAAAAAATGAGGATTGAGGAACAGCCGAGA
CTGTCTGATCTGCTGCTTGAGATTGATAAAAAACAGGCTCGTTTAACTGGTCTGCTTGAGTACTATTTTAATTTCTTCAG
AGGCATGTATGAGCTGGACCAGCGGGAATATCTGTCGGCTATTAAATTTTTCAAGAAGGCCGAAAGCAAGCTGATATTCG
TTAAGGATCGGATAGAGAAAGCTGAGTTTTTCTTTAAGATGTCTGAATCTTATTACTATATGAAACAAACGTATTTTTCA
ATGGACTATGCACGGCAAGCATATGAAATATACAAAGAAAATGAAGCTTATAATATAAGATTGCTGCAGTGTCATTCTTT
ATTTGCCACCAATTTTTTAGATTTAAAACAGTATGAGGATGCCATCTCACATTTTCAAAAAGCTTATTCTATGGCAGAAG
CTGAAAAGCAGCCCCAATTAATGGGAAGAACTTTGTACAATATCGGGCTTTGTAAAAACAGCCAAAGCCAATATGAGGAT
GCCATAACTTATTTCAAAAGAGCAATAGCTGTTTTTGAAGAATCAAATATTCTTCCTTCCTTACCTCAAGCGTATTTTTT
AATTACACAGATCCATTATAAATTAGGAAAAATGGATAAAGCTCATGAATATCATAGTAAGGGAATGGCTTATTCACAAA
AGGCCGGAGATGTAATATATTTATCAGAGTTTGAATTTTTGAAATCTTTATACTTATCAGGCCCGGATGAAGAAGCAATT
CAAGGATTTTTTGATTTTCTCGAAAGTAAAATGTTGTATGCTGATCTTGAAGATTTCGCTATTGATGTGGCAAAATATTA
TCATGAACGTAAAAATTTTCAAAAAGCTTCTGCTTATTTTTTGAAGGTGGAACAAGTAAGGCAACTTATTCAAGGAGGAG
TGAGTTTGTATGAAATTGAAGTCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-290)

• Anaphase-promoting complex, cyclosome, subunit 3 (ANAPC3) (132-208)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	98.95	100	0.99
rapC	Bacillus subtilis subsp. subtilis str. 168	57.632	99.738	0.575