Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | N6G78_RS12240 | Genome accession | NZ_CP104855 |
| Coordinates | 2379661..2380731 (-) | Length | 356 a.a. |
| NCBI ID | WP_015483431.1 | Uniprot ID | - |
| Organism | Bacillus subtilis strain TY-1 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2374661..2385731
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| N6G78_RS12195 (N6G78_12195) | tapA | 2375141..2375902 (-) | 762 | WP_015384085.1 | amyloid fiber anchoring/assembly protein TapA | - |
| N6G78_RS12200 (N6G78_12200) | yqzG | 2376172..2376498 (+) | 327 | WP_015384086.1 | YqzG/YhdC family protein | - |
| N6G78_RS12205 (N6G78_12205) | spoIITA | 2376540..2376719 (-) | 180 | WP_003230176.1 | YqzE family protein | - |
| N6G78_RS12210 (N6G78_12210) | comGG | 2376791..2377165 (-) | 375 | WP_014480253.1 | ComG operon protein ComGG | Machinery gene |
| N6G78_RS12215 (N6G78_12215) | comGF | 2377166..2377549 (-) | 384 | WP_015384087.1 | ComG operon protein ComGF | Machinery gene |
| N6G78_RS12220 (N6G78_12220) | comGE | 2377575..2377922 (-) | 348 | WP_015384088.1 | ComG operon protein 5 | Machinery gene |
| N6G78_RS12225 (N6G78_12225) | comGD | 2377906..2378337 (-) | 432 | WP_015384089.1 | comG operon protein ComGD | Machinery gene |
| N6G78_RS12230 (N6G78_12230) | comGC | 2378327..2378623 (-) | 297 | WP_014477332.1 | comG operon protein ComGC | Machinery gene |
| N6G78_RS12235 (N6G78_12235) | comGB | 2378637..2379674 (-) | 1038 | WP_015483430.1 | comG operon protein ComGB | Machinery gene |
| N6G78_RS12240 (N6G78_12240) | comGA | 2379661..2380731 (-) | 1071 | WP_015483431.1 | competence protein ComGA | Machinery gene |
| N6G78_RS12245 (N6G78_12245) | corA | 2381141..2382094 (-) | 954 | WP_015483432.1 | magnesium transporter CorA | - |
| N6G78_RS12250 (N6G78_12250) | yqhB | 2382237..2383565 (+) | 1329 | WP_003230150.1 | hemolysin family protein | - |
| N6G78_RS12255 (N6G78_12255) | rsbRD | 2383618..2384454 (-) | 837 | WP_015384093.1 | RsbT co-antagonist protein RsbRD | - |
| N6G78_RS12265 (N6G78_12265) | mgsR | 2384678..2385058 (-) | 381 | WP_003230147.1 | transcriptional regulator MgsR | - |
| N6G78_RS12270 (N6G78_12270) | yqgY | 2385290..2385535 (+) | 246 | WP_003226300.1 | DUF2626 domain-containing protein | - |
Sequence
Protein
Download Length: 356 a.a. Molecular weight: 40458.64 Da Isoelectric Point: 9.0175
>NTDB_id=732711 N6G78_RS12240 WP_015483431.1 2379661..2380731(-) (comGA) [Bacillus subtilis strain TY-1]
MDSIEKVSKNLIEEAYLTKASDIHIVPRERDAIIHFRVDHALLKKRDMKKEECVRLISHFKFLSAMDIGERRKPQNGSLT
LKLKEGNVHLRMSTLPTINEESLVIRVMPQYNIPSIDKLSLFPKTGATLLSFLKHSHGMLIFTGPTGSGKTTTLYSLVQY
AKKHFNRNIVTLEDPVETRDEDVLQVQVNEKAGVTYSAGLKAILRHDPDMIILGEIRDAETAEIAVRAAMTGHLVLTSLH
TRDAKGAIYRLLEFGINMNEIEQTVIAIAAQRLVDLACPFCENGCSSVYCRQSRNTRRASVYELLYGKNLQQCIQEAKGN
HANYQYQTLRQIIRKGIALGYITTNNYDRWVYHEKD
MDSIEKVSKNLIEEAYLTKASDIHIVPRERDAIIHFRVDHALLKKRDMKKEECVRLISHFKFLSAMDIGERRKPQNGSLT
LKLKEGNVHLRMSTLPTINEESLVIRVMPQYNIPSIDKLSLFPKTGATLLSFLKHSHGMLIFTGPTGSGKTTTLYSLVQY
AKKHFNRNIVTLEDPVETRDEDVLQVQVNEKAGVTYSAGLKAILRHDPDMIILGEIRDAETAEIAVRAAMTGHLVLTSLH
TRDAKGAIYRLLEFGINMNEIEQTVIAIAAQRLVDLACPFCENGCSSVYCRQSRNTRRASVYELLYGKNLQQCIQEAKGN
HANYQYQTLRQIIRKGIALGYITTNNYDRWVYHEKD
Nucleotide
Download Length: 1071 bp
>NTDB_id=732711 N6G78_RS12240 WP_015483431.1 2379661..2380731(-) (comGA) [Bacillus subtilis strain TY-1]
TTGGATTCAATAGAAAAGGTAAGCAAAAACTTGATTGAAGAGGCATATCTAACAAAGGCTTCTGATATTCACATCGTGCC
GAGGGAGCGGGACGCTATCATTCATTTTCGTGTCGATCATGCCTTGCTGAAAAAAAGGGACATGAAAAAAGAAGAGTGCG
TAAGGCTGATTTCACATTTTAAATTTCTTTCAGCAATGGATATAGGTGAAAGGCGAAAGCCGCAAAACGGTTCGCTTACG
TTAAAGCTGAAAGAGGGAAATGTTCATTTAAGAATGTCAACGCTGCCCACAATTAATGAAGAAAGCCTCGTGATCAGAGT
GATGCCCCAATACAATATCCCTTCGATTGATAAATTGTCGCTATTTCCGAAGACAGGAGCCACATTACTCTCATTTTTAA
AACATTCCCATGGCATGCTCATTTTTACCGGGCCGACTGGTTCAGGGAAGACTACCACATTATACTCTCTCGTTCAATAT
GCAAAAAAACACTTTAATCGAAATATTGTCACATTAGAGGACCCTGTTGAAACAAGGGACGAAGATGTTCTTCAGGTTCA
GGTGAATGAAAAAGCCGGTGTAACTTATTCCGCAGGTCTGAAAGCAATTTTGCGCCATGATCCCGATATGATTATTTTAG
GTGAGATCAGAGACGCGGAAACAGCTGAAATTGCGGTGCGGGCAGCGATGACGGGACATCTGGTACTGACGAGCCTTCAT
ACGAGAGACGCAAAGGGCGCAATTTACAGACTGCTTGAATTCGGTATCAATATGAATGAAATCGAACAGACTGTCATTGC
AATAGCGGCTCAGCGCTTAGTTGATTTGGCTTGCCCGTTTTGTGAAAACGGATGTTCATCAGTGTATTGCCGCCAGTCAC
GAAATACCAGGAGAGCTAGCGTTTATGAGCTTCTTTACGGGAAAAATCTTCAGCAATGTATCCAGGAGGCAAAAGGAAAT
CATGCAAATTACCAATATCAAACGCTTCGTCAAATTATCAGAAAAGGAATTGCGCTCGGCTATATAACGACAAACAACTA
TGACCGGTGGGTTTATCATGAAAAAGATTAG
TTGGATTCAATAGAAAAGGTAAGCAAAAACTTGATTGAAGAGGCATATCTAACAAAGGCTTCTGATATTCACATCGTGCC
GAGGGAGCGGGACGCTATCATTCATTTTCGTGTCGATCATGCCTTGCTGAAAAAAAGGGACATGAAAAAAGAAGAGTGCG
TAAGGCTGATTTCACATTTTAAATTTCTTTCAGCAATGGATATAGGTGAAAGGCGAAAGCCGCAAAACGGTTCGCTTACG
TTAAAGCTGAAAGAGGGAAATGTTCATTTAAGAATGTCAACGCTGCCCACAATTAATGAAGAAAGCCTCGTGATCAGAGT
GATGCCCCAATACAATATCCCTTCGATTGATAAATTGTCGCTATTTCCGAAGACAGGAGCCACATTACTCTCATTTTTAA
AACATTCCCATGGCATGCTCATTTTTACCGGGCCGACTGGTTCAGGGAAGACTACCACATTATACTCTCTCGTTCAATAT
GCAAAAAAACACTTTAATCGAAATATTGTCACATTAGAGGACCCTGTTGAAACAAGGGACGAAGATGTTCTTCAGGTTCA
GGTGAATGAAAAAGCCGGTGTAACTTATTCCGCAGGTCTGAAAGCAATTTTGCGCCATGATCCCGATATGATTATTTTAG
GTGAGATCAGAGACGCGGAAACAGCTGAAATTGCGGTGCGGGCAGCGATGACGGGACATCTGGTACTGACGAGCCTTCAT
ACGAGAGACGCAAAGGGCGCAATTTACAGACTGCTTGAATTCGGTATCAATATGAATGAAATCGAACAGACTGTCATTGC
AATAGCGGCTCAGCGCTTAGTTGATTTGGCTTGCCCGTTTTGTGAAAACGGATGTTCATCAGTGTATTGCCGCCAGTCAC
GAAATACCAGGAGAGCTAGCGTTTATGAGCTTCTTTACGGGAAAAATCTTCAGCAATGTATCCAGGAGGCAAAAGGAAAT
CATGCAAATTACCAATATCAAACGCTTCGTCAAATTATCAGAAAAGGAATTGCGCTCGGCTATATAACGACAAACAACTA
TGACCGGTGGGTTTATCATGAAAAAGATTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Bacillus subtilis subsp. subtilis str. 168 |
99.719 |
100 |
0.997 |
| pilF | Thermus thermophilus HB27 |
36.827 |
99.157 |
0.365 |