Detailed information    

insolico Bioinformatically predicted

Overview

Name   mecA   Type   Regulator
Locus tag   N6G78_RS06220 Genome accession   NZ_CP104855
Coordinates   1197796..1198452 (+) Length   218 a.a.
NCBI ID   WP_015383354.1    Uniprot ID   -
Organism   Bacillus subtilis strain TY-1     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1192796..1203452
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  N6G78_RS06190 (N6G78_06190) oppF 1193265..1194182 (+) 918 WP_003245567.1 oligopeptide ABC transporter ATP-binding protein OppF -
  N6G78_RS06195 (N6G78_06195) yjbB 1194288..1195505 (+) 1218 WP_080030656.1 MFS transporter -
  N6G78_RS06200 (N6G78_06200) yjbC 1195669..1196244 (+) 576 WP_015383352.1 GNAT family N-acetyltransferase -
  N6G78_RS06205 (N6G78_06205) spx 1196425..1196820 (+) 396 WP_014476435.1 transcriptional regulator Spx -
  N6G78_RS06210 (N6G78_06210) yjbE 1196863..1197519 (-) 657 WP_015483086.1 TerC family protein -
  N6G78_RS06215 (N6G78_06215) - 1197689..1197829 (+) 141 WP_119122854.1 hypothetical protein -
  N6G78_RS06220 (N6G78_06220) mecA 1197796..1198452 (+) 657 WP_015383354.1 adaptor protein MecA Regulator
  N6G78_RS06225 (N6G78_06225) - 1198455..1198569 (-) 115 Protein_1163 hypothetical protein -
  N6G78_RS06230 (N6G78_06230) coiA 1198613..1199764 (+) 1152 WP_015483087.1 competence protein CoiA Machinery gene
  N6G78_RS06235 (N6G78_06235) pepF 1199994..1201823 (+) 1830 WP_003245178.1 oligoendopeptidase F -
  N6G78_RS06240 (N6G78_06240) - 1201861..1202028 (-) 168 WP_003244944.1 hypothetical protein -
  N6G78_RS06245 (N6G78_06245) spxH 1202343..1203242 (-) 900 WP_003245184.1 protease adaptor protein SpxH -

Sequence

Protein


Download         Length: 218 a.a.        Molecular weight: 25749.62 Da        Isoelectric Point: 4.0841

>NTDB_id=732689 N6G78_RS06220 WP_015383354.1 1197796..1198452(+) (mecA) [Bacillus subtilis strain TY-1]
MEIERINEHTVKFYMSYGDIEDRGFDREEIWYNRERSEELFWEVMDEVHEEEEFAVEGPLWIQVQALDKGLEIIVTKAQL
SKDGQKLELPIPEDKKQEPASEDLDALLDDFQKEEQAVNQEEKEQKLQFVLRFGDFEDVISLSNLNVNGSKTTLYSFENR
YYLYVDFCNMTDEEVENQLSILLEYATESSISIHRLEEYGKLIISEHALETIKKHFAS

Nucleotide


Download         Length: 657 bp        

>NTDB_id=732689 N6G78_RS06220 WP_015383354.1 1197796..1198452(+) (mecA) [Bacillus subtilis strain TY-1]
ATGGAAATTGAAAGAATTAACGAGCATACAGTAAAATTTTATATGTCTTACGGAGATATTGAAGATCGCGGTTTTGACAG
AGAAGAAATTTGGTATAACCGTGAGCGCAGTGAAGAACTTTTCTGGGAAGTCATGGATGAAGTTCATGAAGAAGAGGAAT
TCGCTGTGGAAGGCCCACTTTGGATTCAAGTTCAGGCACTGGACAAAGGATTAGAAATCATCGTCACAAAAGCCCAGCTT
TCCAAAGACGGACAAAAGCTCGAACTGCCGATTCCTGAGGATAAAAAGCAAGAACCAGCATCTGAGGATCTTGACGCCTT
GCTGGATGATTTCCAGAAAGAAGAGCAAGCTGTCAATCAGGAAGAGAAGGAGCAAAAGCTTCAATTTGTCTTGCGATTTG
GCGATTTTGAGGATGTTATTTCTCTATCTAATTTGAACGTTAACGGAAGCAAAACGACTTTATATTCGTTTGAGAACCGA
TATTATTTATATGTAGATTTTTGCAATATGACTGATGAAGAGGTTGAAAATCAGCTAAGCATCCTGCTGGAGTACGCAAC
TGAATCCTCAATCAGCATACACCGTCTTGAAGAGTACGGCAAGCTGATTATTTCAGAGCATGCTCTAGAAACGATAAAAA
AACACTTTGCATCATAA

Domains

Predicted by InterproScan.

Negative regulator of genetic competence (MecA) (MecA)

(1-212)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

99.541

100

0.995