Detailed information    

insolico Bioinformatically predicted

Overview

Name   comO   Type   Machinery gene
Locus tag   N5P13_RS15330 Genome accession   NZ_CP104736
Coordinates   3268319..3269056 (-) Length   245 a.a.
NCBI ID   WP_004923719.1    Uniprot ID   A0A7G2SAI8
Organism   Acinetobacter baylyi strain JAT2091     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 3263319..3274056
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  N5P13_RS15310 (N5P13_15310) aroB 3263917..3265005 (-) 1089 WP_004923735.1 3-dehydroquinate synthase -
  N5P13_RS15315 (N5P13_15315) aroK 3265027..3265569 (-) 543 WP_004923733.1 shikimate kinase AroK -
  N5P13_RS15320 (N5P13_15320) comQ 3265606..3267735 (-) 2130 WP_004923730.1 type IV pilus secretin PilQ Machinery gene
  N5P13_RS15325 (N5P13_15325) comL 3267795..3268319 (-) 525 WP_004923726.1 pilus assembly protein PilP Machinery gene
  N5P13_RS15330 (N5P13_15330) comO 3268319..3269056 (-) 738 WP_004923719.1 type 4a pilus biogenesis protein PilO Machinery gene
  N5P13_RS15335 (N5P13_15335) comN 3269053..3269691 (-) 639 WP_004923716.1 PilN domain-containing protein Machinery gene
  N5P13_RS15340 (N5P13_15340) comM 3269688..3270749 (-) 1062 WP_004923715.1 pilus assembly protein PilM Machinery gene
  N5P13_RS15345 (N5P13_15345) ponA 3270915..3273473 (+) 2559 WP_004923711.1 penicillin-binding protein PBP1a -

Sequence

Protein


Download         Length: 245 a.a.        Molecular weight: 27921.83 Da        Isoelectric Point: 6.2680

>NTDB_id=731758 N5P13_RS15330 WP_004923719.1 3268319..3269056(-) (comO) [Acinetobacter baylyi strain JAT2091]
MKLDQLDKTPKESGQPKKKRMNVEKFFQQFNMLDMSNYGSWPLSVKITCWIFIFFLVCALGYFVVIRPQLDDIQTAQAQE
KNLLNEFREKQSKLRNLQQYQHQLEEMRASFNQQLTQLPKESEIPGLVEDINMTGVNSGLKFKNIRLENEVKQEFFIEQP
ISIEATGDYHAFGAFVSGIAALPRIVTLHDFVIEAKQSKEKTDIPEVDYAVKAKTYRYIGVDEQGNASAVQANTSTTTPA
QGGTP

Nucleotide


Download         Length: 738 bp        

>NTDB_id=731758 N5P13_RS15330 WP_004923719.1 3268319..3269056(-) (comO) [Acinetobacter baylyi strain JAT2091]
ATGAAACTTGATCAGCTTGATAAAACCCCAAAAGAATCTGGCCAACCTAAGAAAAAACGCATGAATGTTGAAAAATTCTT
TCAACAATTCAATATGCTGGATATGAGCAATTACGGCAGTTGGCCGCTCTCAGTCAAGATAACATGCTGGATTTTTATTT
TCTTTCTAGTCTGTGCGTTGGGCTACTTTGTGGTGATTCGACCTCAGCTTGACGATATTCAGACAGCGCAGGCGCAAGAA
AAAAATCTGTTAAATGAATTTCGCGAAAAACAGTCCAAACTTAGAAATTTACAACAGTACCAACATCAGCTTGAAGAAAT
GCGTGCGAGCTTTAATCAGCAGCTCACACAACTTCCCAAAGAAAGCGAAATTCCTGGATTGGTCGAAGATATTAATATGA
CAGGCGTAAATTCTGGTCTGAAATTTAAGAACATTCGTCTTGAAAATGAGGTTAAGCAGGAATTCTTTATTGAGCAACCC
ATTTCAATAGAGGCTACCGGGGATTATCATGCCTTTGGTGCCTTTGTGAGTGGTATTGCTGCATTACCTCGAATTGTGAC
CTTGCATGATTTTGTAATTGAAGCCAAACAGAGTAAAGAGAAAACCGATATTCCAGAAGTTGATTACGCTGTGAAAGCGA
AAACATATCGTTACATTGGTGTCGATGAGCAGGGCAATGCATCAGCTGTTCAGGCCAATACCTCAACGACAACTCCTGCA
CAAGGAGGTACACCATAA

Domains

Predicted by InterproScan.

Pilus assembly protein, PilO (PilO)

(73-219)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7G2SAI8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comO Acinetobacter baylyi ADP1

100

100

1
  pilO Acinetobacter baumannii D1279779

69.421

98.776

0.686