Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | N5P16_RS07930 | Genome accession | NZ_CP104734 |
| Coordinates | 1715920..1716306 (+) | Length | 128 a.a. |
| NCBI ID | WP_004928170.1 | Uniprot ID | A0A7G2SIF8 |
| Organism | Acinetobacter baylyi strain JAT2044 | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1710920..1721306
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| N5P16_RS07900 (N5P16_07900) | kdsB | 1711820..1712581 (+) | 762 | WP_004928188.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
| N5P16_RS07905 (N5P16_07905) | - | 1712597..1713583 (+) | 987 | WP_004928184.1 | DNA polymerase III subunit delta' | - |
| N5P16_RS07910 (N5P16_07910) | - | 1713586..1713930 (+) | 345 | WP_004928181.1 | PilZ domain-containing protein | - |
| N5P16_RS07915 (N5P16_07915) | - | 1713948..1714721 (+) | 774 | WP_004928179.1 | TatD family hydrolase | - |
| N5P16_RS07920 (N5P16_07920) | - | 1714761..1715369 (+) | 609 | WP_004928177.1 | TetR/AcrR family transcriptional regulator | - |
| N5P16_RS07925 (N5P16_07925) | - | 1715382..1715930 (+) | 549 | WP_004928174.1 | type II secretion system protein | - |
| N5P16_RS07930 (N5P16_07930) | xcpV | 1715920..1716306 (+) | 387 | WP_004928170.1 | type II secretion system minor pseudopilin GspI | Machinery gene |
| N5P16_RS07935 (N5P16_07935) | xcpW | 1716303..1716929 (+) | 627 | WP_004928166.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| N5P16_RS07940 (N5P16_07940) | gspK | 1716944..1717912 (+) | 969 | WP_004928163.1 | type II secretion system minor pseudopilin GspK | - |
| N5P16_RS07945 (N5P16_07945) | - | 1718071..1718667 (+) | 597 | WP_004928159.1 | 6-pyruvoyl trahydropterin synthase family protein | - |
| N5P16_RS07950 (N5P16_07950) | ung | 1718721..1719434 (+) | 714 | WP_004928156.1 | uracil-DNA glycosylase | - |
| N5P16_RS07955 (N5P16_07955) | - | 1719431..1720552 (+) | 1122 | WP_004928151.1 | enoyl-CoA hydratase/isomerase family protein | - |
| N5P16_RS07960 (N5P16_07960) | tadA | 1720558..1721082 (+) | 525 | WP_004928147.1 | tRNA adenosine(34) deaminase TadA | - |
Sequence
Protein
Download Length: 128 a.a. Molecular weight: 14241.30 Da Isoelectric Point: 8.5287
>NTDB_id=731703 N5P16_RS07930 WP_004928170.1 1715920..1716306(+) (xcpV) [Acinetobacter baylyi strain JAT2044]
MKAKGFTLLEVMVALAIFATAAVALTKLGMQYTQSTANAILRTKAQFVAMNEASLMQINHEWLQGTQSKQVTSQGETWQI
DKRAESTISPNVQRIEIQVSLFDTQQNKVEAGITNLVFFNYPQKENAS
MKAKGFTLLEVMVALAIFATAAVALTKLGMQYTQSTANAILRTKAQFVAMNEASLMQINHEWLQGTQSKQVTSQGETWQI
DKRAESTISPNVQRIEIQVSLFDTQQNKVEAGITNLVFFNYPQKENAS
Nucleotide
Download Length: 387 bp
>NTDB_id=731703 N5P16_RS07930 WP_004928170.1 1715920..1716306(+) (xcpV) [Acinetobacter baylyi strain JAT2044]
ATGAAAGCTAAAGGATTTACCTTGCTTGAGGTGATGGTGGCATTGGCCATTTTCGCAACTGCTGCCGTAGCACTGACGAA
ACTTGGAATGCAATATACCCAATCGACAGCGAATGCAATTTTAAGAACAAAAGCTCAATTTGTTGCGATGAATGAAGCCT
CATTAATGCAAATCAATCATGAATGGTTGCAAGGTACGCAATCTAAACAAGTGACTTCACAAGGTGAAACTTGGCAGATT
GACAAGCGTGCTGAATCAACTATAAGCCCGAATGTGCAACGGATTGAAATACAGGTTAGTCTTTTTGATACCCAGCAAAA
TAAGGTTGAAGCGGGAATTACCAATCTGGTTTTTTTTAATTATCCGCAAAAAGAGAATGCCTCATGA
ATGAAAGCTAAAGGATTTACCTTGCTTGAGGTGATGGTGGCATTGGCCATTTTCGCAACTGCTGCCGTAGCACTGACGAA
ACTTGGAATGCAATATACCCAATCGACAGCGAATGCAATTTTAAGAACAAAAGCTCAATTTGTTGCGATGAATGAAGCCT
CATTAATGCAAATCAATCATGAATGGTTGCAAGGTACGCAATCTAAACAAGTGACTTCACAAGGTGAAACTTGGCAGATT
GACAAGCGTGCTGAATCAACTATAAGCCCGAATGTGCAACGGATTGAAATACAGGTTAGTCTTTTTGATACCCAGCAAAA
TAAGGTTGAAGCGGGAATTACCAATCTGGTTTTTTTTAATTATCCGCAAAAAGAGAATGCCTCATGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
79.839 |
96.875 |
0.773 |