NTDB

Overview

Name	tsaP	Type	Machinery gene
Locus tag	N5P16_RS01030	Genome accession	NZ_CP104734
Coordinates	225187..226344 (+)	Length	385 a.a.
NCBI ID	WP_004930460.1	Uniprot ID	A0A7G2SAA0
Organism	Acinetobacter baylyi strain JAT2044
Function	assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 220187..231344

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
N5P16_RS01005 (N5P16_01005)	-	220319..221524 (+)	1206	WP_004930449.1	oxygenase MpaB family protein	-
N5P16_RS16815	-	221723..221854 (-)	132	Protein_188	hypothetical protein	-
N5P16_RS01015 (N5P16_01015)	-	221935..223923 (-)	1989	WP_004930454.1	TonB-dependent copper receptor	-
N5P16_RS01020 (N5P16_01020)	-	224026..224457 (-)	432	WP_004930457.1	DUF2946 family protein	-
N5P16_RS01025 (N5P16_01025)	def	224542..225066 (-)	525	WP_004930458.1	peptide deformylase	-
N5P16_RS01030 (N5P16_01030)	tsaP	225187..226344 (+)	1158	WP_004930460.1	LysM peptidoglycan-binding domain-containing protein	Machinery gene
N5P16_RS01035 (N5P16_01035)	dprA	226362..227513 (+)	1152	WP_004930462.1	DNA-processing protein DprA	Machinery gene
N5P16_RS01040 (N5P16_01040)	-	227553..228125 (+)	573	WP_004930465.1	L-threonylcarbamoyladenylate synthase	-
N5P16_RS01045 (N5P16_01045)	-	228661..229578 (-)	918	WP_004930467.1	ABC transporter permease	-
N5P16_RS01050 (N5P16_01050)	-	229591..230697 (-)	1107	WP_004930471.1	ABC transporter permease	-

Sequence

Protein

Download Length: 385 a.a. Molecular weight: 42810.15 Da Isoelectric Point: 8.9324

                                >NTDB_id=731681 N5P16_RS01030 WP_004930460.1 225187..226344(+) (tsaP) [Acinetobacter baylyi strain JAT2044]

MKKVLNGLRSFYQLGLKQHGLALAICTGIGVTCLGSTTVEAATRNINPPALKAGAPNVYIVKKGDTLWDISGKFLKKPWR

WPEIWASNKHVKNPHWIYPGDRLLLCTLDGRPLVGRDQGDGCEGIIRRYTGRTTLQPQVRIEQLNNIIPVIPLDHIQQWL

ERATIVSAENIKAAPYILGTTDQRVLAAKGQQVYVRGQGLQNAQRYAVYREGEPYTTLDEHGKKRIIGIELLQVASGIAT

QSENDITTMELTQSFNSEVRRGDLVLPEEQAMLPTLFYPTEAHQVMEGGKIIRVMGSISTAGKHSVVTLNRGTTQGTQVG

QVFDIYQQGEVVKDPKTQENIKLPNQNIGSLMIFKTFDELSYAYILESSLPVKVGAEIKPPREED

Nucleotide

Download Length: 1158 bp

                                >NTDB_id=731681 N5P16_RS01030 WP_004930460.1 225187..226344(+) (tsaP) [Acinetobacter baylyi strain JAT2044]

ATGAAAAAGGTTTTGAACGGCTTACGCTCATTTTATCAATTGGGGTTAAAACAACATGGTCTTGCGCTAGCAATCTGTAC

TGGGATTGGAGTTACCTGCTTAGGGAGCACCACGGTCGAGGCAGCTACACGCAATATCAATCCACCGGCATTAAAAGCGG

GTGCTCCAAATGTCTACATTGTTAAAAAAGGAGATACGCTTTGGGATATTTCGGGTAAATTTTTAAAAAAACCATGGCGC

TGGCCTGAAATCTGGGCCAGTAATAAACATGTAAAAAATCCACACTGGATTTATCCAGGTGATCGTTTATTACTGTGTAC

CCTAGATGGACGTCCATTGGTTGGGCGAGATCAAGGCGACGGATGCGAAGGAATTATCCGACGTTATACAGGCAGAACCA

CGCTTCAGCCACAAGTTAGAATTGAACAGCTCAACAATATCATTCCTGTTATTCCTCTAGATCATATCCAGCAGTGGTTA

GAACGGGCAACCATTGTATCTGCAGAGAATATTAAAGCAGCACCATACATTTTAGGTACGACAGATCAGCGTGTTTTAGC

CGCTAAAGGTCAGCAGGTGTATGTTCGTGGTCAAGGTTTACAAAATGCTCAACGCTATGCCGTCTATCGTGAGGGTGAAC

CTTACACCACTCTGGATGAGCATGGTAAAAAACGTATTATTGGTATTGAGTTATTACAGGTTGCCTCTGGTATTGCAACA

CAGTCAGAAAATGACATTACCACCATGGAGCTCACTCAGAGTTTTAATTCCGAAGTCCGTCGTGGTGATTTAGTCCTTCC

TGAAGAGCAAGCGATGTTACCAACTCTGTTTTATCCCACTGAGGCTCATCAGGTCATGGAGGGGGGTAAAATTATTCGGG

TGATGGGTTCAATTTCTACCGCTGGAAAGCACAGTGTCGTCACTTTAAATCGCGGCACAACACAAGGCACTCAAGTGGGT

CAGGTATTTGATATCTATCAACAAGGTGAAGTCGTTAAAGACCCTAAGACACAAGAAAATATTAAACTTCCAAACCAGAA

TATTGGGAGCTTAATGATTTTTAAAACTTTTGATGAATTAAGTTATGCTTATATTCTTGAAAGCAGCCTACCAGTCAAGG

TAGGGGCAGAAATAAAACCACCTCGTGAAGAGGATTAA

Domains

Predicted by InterproScan.

LysM domain (LysM)

(59-104)

Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.

3D structure

Source	ID	Structure
AlphaFold DB	A0A7G2SAA0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.

Visualization of predicted probability:

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	H_a-value
tsaP	Acinetobacter baumannii D1279779	70.466	100	0.706

Detailed information NTG0731681