Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   N5A89_RS09180 Genome accession   NZ_CP104714
Coordinates   2050343..2051620 (-) Length   425 a.a.
NCBI ID   WP_088771159.1    Uniprot ID   A0A241RT34
Organism   Lactiplantibacillus pentosus strain 68-1     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 2045343..2056620
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  N5A89_RS09175 (N5A89_09175) - 2048595..2050304 (-) 1710 WP_261638870.1 proline--tRNA ligase -
  N5A89_RS09180 (N5A89_09180) eeP 2050343..2051620 (-) 1278 WP_088771159.1 RIP metalloprotease RseP Regulator
  N5A89_RS09185 (N5A89_09185) - 2051657..2052442 (-) 786 WP_050338486.1 phosphatidate cytidylyltransferase -
  N5A89_RS09190 (N5A89_09190) - 2052458..2053237 (-) 780 WP_050338485.1 isoprenyl transferase -
  N5A89_RS09195 (N5A89_09195) frr 2053357..2053920 (-) 564 WP_003638966.1 ribosome recycling factor -
  N5A89_RS09200 (N5A89_09200) pyrH 2053922..2054644 (-) 723 WP_003638967.1 UMP kinase -
  N5A89_RS09205 (N5A89_09205) tsf 2054844..2055722 (-) 879 WP_003638968.1 translation elongation factor Ts -

Sequence

Protein


Download         Length: 425 a.a.        Molecular weight: 46230.85 Da        Isoelectric Point: 10.0234

>NTDB_id=731490 N5A89_RS09180 WP_088771159.1 2050343..2051620(-) (eeP) [Lactiplantibacillus pentosus strain 68-1]
MIVTIITFIIVFGILVIVHEFGHFYFAKKAGILVREFSVGMGPKAVAFRRNATTYTLRFLPIGGYVRMAGVADDEDEELK
PGTPVSLQIGQDGIVHSINASKKTTLFNGIPLSVTATDLERELWIEGYENGDESEVKRYSVDHDATIIESDGTEVQIAPV
DVQFQSAKLWQRMLTNFAGPMNNFILAIITFAILAFMQGGVTSTTTNVAATTANSVARQAGIQKGDQIVAVNGKKMTSAQ
SISLLIQDSPKQRLRLTIKRDGQTKKITVTPAAKTVSGNRIGQIGVMWATKTDKSFGAKLAYGFTGSWNITKQIFQVLGR
MVTHGFSLNDLGGPVAIFATTSQAAKSGLRTVIYLLAVLSINLGIVNLLPIPALDGGKLLLNIVEGIRGKPLRVETESVI
TLIGFGLLMLLMILVTWNDIQRYFF

Nucleotide


Download         Length: 1278 bp        

>NTDB_id=731490 N5A89_RS09180 WP_088771159.1 2050343..2051620(-) (eeP) [Lactiplantibacillus pentosus strain 68-1]
TTGATCGTTACAATTATTACGTTCATTATCGTTTTCGGAATCTTGGTTATCGTCCATGAATTTGGGCACTTCTATTTTGC
CAAAAAGGCTGGGATTTTGGTGCGTGAATTTTCTGTTGGGATGGGACCCAAGGCAGTTGCGTTTCGGCGGAATGCGACGA
CTTATACGTTACGTTTCTTGCCAATTGGTGGGTACGTGCGGATGGCCGGAGTCGCTGACGATGAAGATGAGGAACTGAAA
CCCGGAACGCCAGTTAGCTTACAAATCGGTCAGGATGGCATCGTCCATTCAATCAATGCTAGTAAGAAAACGACGTTGTT
CAACGGGATCCCGTTATCTGTCACGGCGACTGACTTAGAGCGCGAACTATGGATCGAAGGCTATGAGAATGGCGACGAGA
GCGAAGTTAAACGTTATTCAGTCGACCACGATGCGACCATTATCGAAAGTGATGGGACTGAGGTGCAGATTGCCCCAGTA
GATGTTCAATTTCAGTCAGCCAAGCTTTGGCAGCGGATGCTGACCAATTTTGCTGGTCCCATGAATAACTTCATCTTAGC
CATCATCACGTTTGCAATCCTGGCGTTCATGCAGGGTGGCGTGACGAGTACGACGACTAATGTTGCGGCGACGACGGCCA
ATTCGGTTGCGCGTCAAGCTGGGATTCAAAAAGGTGATCAAATTGTCGCTGTCAATGGTAAAAAGATGACCAGTGCGCAG
TCGATTTCGCTCCTGATTCAAGACAGTCCCAAGCAACGGTTGCGTTTGACGATCAAACGTGATGGTCAAACCAAAAAAAT
TACGGTAACACCAGCTGCTAAGACGGTCTCTGGTAATCGCATCGGCCAAATCGGCGTGATGTGGGCGACGAAGACTGACA
AGAGTTTTGGTGCCAAATTGGCCTATGGGTTTACGGGCTCGTGGAATATCACCAAACAGATTTTTCAGGTCCTCGGCCGG
ATGGTCACGCATGGCTTCAGTTTGAACGATTTAGGTGGCCCGGTCGCTATCTTTGCCACGACCTCGCAAGCAGCTAAATC
AGGTCTGCGAACGGTGATTTATTTGCTGGCAGTCTTGTCGATCAACCTGGGAATTGTCAATTTATTACCAATTCCAGCCC
TCGATGGTGGTAAACTATTATTAAACATTGTTGAAGGCATTCGGGGTAAACCACTACGAGTGGAAACGGAAAGTGTCATT
ACCTTGATTGGTTTTGGCCTCTTGATGTTATTAATGATTTTAGTCACTTGGAATGATATCCAACGATATTTCTTCTAA

Domains

Predicted by InterproScan.

Peptidase family M50 (Peptidase_M50)

(7-411)

PDZ domain (PDZ_6)

(212-260)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A241RT34

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

49.299

100

0.496
  eeP Streptococcus thermophilus LMD-9

49.065

100

0.494