Detailed information NTG0073109

Bioinformatically predicted

Overview

• Name: chiS
• Type: Regulator
• Locus tag: GZN30_RS00875
• Genome accession: NZ_AP019657
• Coordinates: 188475..191858 (-)
• Length: 1127 a.a.
• NCBI ID: WP_075649340.1
• Uniprot ID: -
• Organism: Vibrio ponticus strain DSM 16217
• Function: chitin sensor (predicted from homology) Competence regulation

Genomic Context

Location: 183475..196858

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GZN30_RS00860	-	183963..184988 (-)	1026	WP_075649343.1	ABC transporter permease	-
GZN30_RS00865	-	184991..185977 (-)	987	WP_075649342.1	ABC transporter permease	-
GZN30_RS00870	-	186150..187832 (-)	1683	WP_075649341.1	ABC transporter substrate-binding protein	-
GZN30_RS00875	chiS	188475..191858 (-)	3384	WP_075649340.1	ATP-binding protein	Regulator
GZN30_RS00880	rsmC	192123..193145 (-)	1023	WP_075649339.1	16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC	-
GZN30_RS00885	-	193204..194289 (-)	1086	WP_075649338.1	AI-2E family transporter	-
GZN30_RS00890	hemL	194539..195831 (-)	1293	WP_075649337.1	glutamate-1-semialdehyde 2,1-aminomutase	-
GZN30_RS00895	erpA	196121..196462 (+)	342	WP_075649336.1	iron-sulfur cluster insertion protein ErpA	-

Sequence

Protein

• Length: 1127 a.a.
• Molecular weight: 127195.76 Da
• Isoelectric Point: 5.6911

>NTDB_id=73109 GZN30_RS00875 WP_075649340.1 188475..191858(-) (chiS) [Vibrio ponticus strain DSM 16217]
MFKLYRKQRFKRLQNTLMGAFLALSITPLTLIALFFLQSHSEDLQEQSTSHLISVRDSKHQQITDYLNARESEVMGFVRS
ELAYASGGRFYGLVNAFQSLGLNMDQAREFAQKRYIPGSGNQIKTSILPESPVFNGTERYRLLHTRYHRAYLELLKRSDF
DDILLVDINGNVTYSIFKYDYYGTNLLDGKFEQQNLGLAFKKLRDEVNKKRKDNQDYTPVVFSDFMQEGDKSFAWIGAPI
IQQGYLHSYAMFRLPNNSLTKLIADNNNVWSIKTLLVGQDNKLRTLSYQQQDVDSSQSIINTAFEKPAMVGTFTNSTGAE
VIAAHSHIQSKGLDWALVVEVSEQEAFSRIKQLETVFVVAMLLAIVLVVIASHYLSNFITAPLLKLTWSAEKASAGDLNA
EISTERKDEIGRLAIAFERMQRSIREKMALIKEQNVELESNIKLIQQKNDELQIANKLKDEFLATTSHELRTPLHGMIGI
AEALISGANGPIRSEHKYQLDIIISSGQRLANLVDDLLDYHKMRYGNMDIATRAVDLSSATRLVLELSSHLLGNKQIRII
NQVPSEPVWIAADPQRLEQVLYNLVGNAIKYTHEGKIVISANIVDAKMRIQVVDTGQGIPADQLEHIFEPLTQAGSDTSR
YRQGAGLGLSISRQLIELMGGSLYVSSQPMVGTTFSFTLPLATEEQIALTSHSDSIHFIAPDNFDIEDNDATNLPENPDG
ELLLVVDDEPVNVKVLESFLKISGYRVRCAKDGYEALQSIEEEKPALVLLDVMMPGLTGYQVCETIREQFDSIELPVIML
TALNQTDDRIRGFNSGANDYLSKPFNKQELAARMQVHLAASQAEMRRLENQALQDELRQRSAVEASLIETQTRLLEQLES
APEAIICTRTDGKVRFANEAAARMFKRSIEQLKRASAEELLSPKFLDITQPHYCGKVDIYIEDTRQHVNGDILRLPEASG
LKSMYIFDHGGGANAARINNLETAIEALTSYAFDGDKAKLQQLKELGGEFTRLADRVTGEQKSKQELMREVLVEAMTTAL
DYWESSTGNSKFVFAEQSGLWRVYLDRSTLQTRTLDKYLRIETLPKTPRWRTVLTSLEYILDNCSDLTKERSKIEELRDK
LQHLLTT

Nucleotide

• Length: 3384 bp

>NTDB_id=73109 GZN30_RS00875 WP_075649340.1 188475..191858(-) (chiS) [Vibrio ponticus strain DSM 16217]
ATGTTTAAGTTGTATCGGAAACAACGCTTTAAACGCCTGCAAAACACCTTGATGGGTGCGTTTTTAGCGTTAAGTATCAC
GCCACTTACACTGATTGCTCTATTCTTCTTGCAGTCTCATAGCGAAGATCTCCAAGAACAAAGCACCTCGCACCTAATCT
CTGTTCGTGACAGTAAACATCAGCAAATCACCGATTATCTCAATGCTCGTGAGTCGGAGGTGATGGGGTTTGTTCGCTCT
GAATTGGCCTATGCGAGTGGTGGACGTTTTTATGGACTGGTGAATGCTTTCCAAAGTCTTGGTCTGAATATGGATCAAGC
ACGTGAGTTTGCCCAGAAACGTTATATCCCAGGCTCAGGCAATCAAATTAAAACCTCAATTTTACCTGAATCTCCTGTAT
TTAACGGCACTGAGCGTTATCGCCTATTACATACCCGTTATCATCGCGCCTATCTAGAACTACTAAAACGTTCCGATTTT
GACGATATCTTACTGGTCGATATCAACGGCAACGTGACCTATTCTATTTTTAAATATGATTACTACGGCACCAACTTACT
CGATGGCAAATTCGAGCAACAAAATTTAGGTTTGGCTTTTAAGAAACTTCGAGATGAGGTGAATAAGAAGCGGAAAGACA
ACCAGGACTACACACCCGTGGTGTTTTCTGATTTCATGCAAGAAGGCGATAAAAGCTTTGCTTGGATTGGCGCACCAATC
ATTCAACAAGGCTACTTGCACAGCTATGCTATGTTTCGATTACCAAATAACAGTCTAACAAAGCTGATTGCTGACAATAA
TAATGTATGGTCAATCAAGACATTATTGGTGGGACAAGACAATAAACTGCGTACCCTTTCTTATCAGCAGCAAGATGTCG
ACAGCAGCCAATCGATCATCAATACCGCATTTGAAAAACCGGCCATGGTTGGCACCTTTACCAACTCAACTGGCGCGGAA
GTGATTGCAGCACACAGCCACATTCAATCAAAAGGTTTAGATTGGGCGCTCGTGGTCGAAGTTTCAGAACAAGAGGCTTT
CTCACGAATTAAGCAGTTAGAAACCGTATTCGTGGTCGCGATGCTATTGGCGATAGTGCTGGTTGTGATCGCTTCCCATT
ACCTCTCGAATTTTATTACCGCTCCTTTGCTTAAACTGACTTGGTCTGCAGAAAAAGCGTCAGCTGGCGATCTCAATGCT
GAAATCAGCACTGAGCGTAAAGATGAAATTGGTCGTTTGGCGATCGCTTTTGAGCGAATGCAACGCTCGATACGAGAAAA
AATGGCGTTAATTAAAGAACAGAACGTCGAGTTGGAAAGTAACATTAAGCTGATCCAACAAAAAAACGATGAGTTGCAAA
TCGCCAACAAACTCAAAGATGAGTTCCTTGCCACGACCTCACATGAATTGCGTACCCCGCTGCATGGCATGATCGGTATT
GCCGAAGCTCTGATATCTGGAGCTAATGGTCCGATCCGCTCTGAACATAAATATCAGCTAGACATTATTATCAGTAGCGG
ACAACGCTTAGCCAACTTGGTGGATGATTTACTCGACTATCATAAGATGCGCTATGGCAACATGGATATTGCCACCCGAG
CCGTTGATCTCTCCAGTGCCACACGCTTAGTGCTTGAGCTATCATCGCACTTGCTAGGCAATAAACAGATCCGCATCATC
AACCAAGTACCATCAGAGCCGGTCTGGATTGCAGCCGATCCACAACGTTTAGAACAAGTGCTGTATAACTTAGTTGGCAA
TGCGATTAAATACACCCATGAAGGCAAAATCGTCATCTCAGCTAACATTGTCGATGCCAAAATGCGCATTCAAGTGGTCG
ATACTGGACAAGGTATACCAGCCGATCAGCTAGAACACATTTTTGAACCTCTTACTCAAGCTGGCAGCGACACTAGCCGC
TATCGTCAAGGAGCAGGGCTGGGGCTTTCAATTAGTCGTCAACTCATTGAATTAATGGGTGGTTCACTCTATGTCAGCAG
CCAACCAATGGTCGGTACAACCTTTAGCTTTACGCTTCCACTCGCAACGGAAGAGCAGATCGCATTGACGAGCCATAGCG
ATAGTATCCACTTCATTGCGCCCGATAATTTTGATATCGAAGACAATGACGCCACCAATTTACCTGAAAACCCAGATGGT
GAGCTGCTCCTAGTGGTCGATGATGAACCCGTCAATGTCAAGGTTCTAGAAAGCTTCCTCAAAATCTCTGGTTATCGTGT
ACGTTGTGCAAAAGATGGTTATGAAGCGCTGCAATCCATCGAAGAGGAAAAGCCTGCGCTGGTTCTGCTCGATGTAATGA
TGCCTGGTTTAACCGGTTATCAAGTTTGCGAAACAATTCGAGAACAATTTGACAGCATTGAACTGCCAGTCATCATGCTT
ACTGCCCTCAATCAAACCGACGACCGTATCCGTGGTTTTAACTCTGGTGCCAATGACTATTTATCTAAGCCGTTTAATAA
ACAAGAACTGGCAGCGAGAATGCAAGTTCACCTAGCCGCTAGCCAAGCGGAGATGCGTCGTTTAGAAAACCAAGCTTTGC
AAGATGAGCTGCGCCAACGCTCTGCGGTAGAAGCAAGTTTGATCGAAACCCAAACACGGCTGCTTGAACAGCTCGAATCT
GCGCCTGAAGCGATTATTTGTACACGAACAGATGGAAAAGTACGCTTTGCCAATGAAGCGGCAGCAAGAATGTTTAAGCG
CTCAATTGAGCAGCTCAAGCGTGCCTCAGCTGAAGAGTTACTGTCACCGAAGTTTCTCGACATCACTCAACCTCATTATT
GCGGTAAAGTAGACATCTATATCGAAGATACCCGTCAGCACGTCAATGGCGATATATTGCGCCTACCTGAAGCCTCAGGT
CTAAAGTCGATGTATATATTTGACCATGGCGGAGGGGCTAATGCGGCGCGCATCAACAACTTAGAAACCGCTATTGAAGC
ACTCACCAGCTATGCATTTGATGGTGACAAAGCCAAACTACAGCAACTAAAAGAGCTTGGTGGGGAGTTTACTCGCCTTG
CAGACCGAGTAACTGGTGAACAAAAATCCAAACAGGAACTGATGCGAGAAGTGTTGGTTGAGGCGATGACAACCGCTTTG
GACTACTGGGAGAGCTCGACTGGCAATAGTAAGTTTGTCTTTGCTGAACAAAGTGGCTTATGGCGCGTCTATCTCGACCG
CAGTACGTTACAAACCCGAACGTTAGATAAGTATTTGCGTATCGAGACTTTACCAAAGACACCTCGCTGGAGAACCGTGC
TTACCTCATTAGAGTACATTCTGGATAACTGCTCCGACTTAACCAAAGAGCGCAGCAAAATCGAAGAGTTGCGAGATAAA
TTGCAACATCTCCTCACCACGTAA

Domains

Predicted by InterproScan.

• His Kinase A (phospho-acceptor) domain (HisKA) (459-524)

• HAMP domain (HAMP) (375-426)

• PAS fold (PAS) (876-924)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (573-682)

• Response regulator receiver domain (Response_reg) (724-834)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
chiS	Vibrio cholerae strain A1552	71.454	100	0.715